DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdk1 and PDK1

DIOPT Version :9

Sequence 1:NP_001261183.1 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_568138.1 Gene:PDK1 / 830330 AraportID:AT5G04510 Length:491 Species:Arabidopsis thaliana


Alignment Length:534 Identity:173/534 - (32%)
Similarity:254/534 - (47%) Gaps:89/534 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 PAPRRSPNDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKREREVMHQM 301
            |....:.:||.||:..|.||||.|..|....:...||:|:.:|:.|.:|.|..|:|.||.|:.|:
plant    35 PQENFTSHDFEFGKIYGVGSYSKVVRAKKKETGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 99

  Fly   302 TNVPGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLACEHMHRRNV 366
            .: ||.:.|..||||..|||..:.....|::...|.|.|.......|.|.||::.|.|::|...:
plant   100 EH-PGIIKLYFTFQDTSSLYMALESCEGGELFDQITRKGRLSEDEARFYTAEVVDALEYIHSMGL 163

  Fly   367 VHRDLKPENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLENEDED 431
            :|||:||||:||..|.|..||||||.|.|                      .|.....|.|...|
plant   164 IHRDIKPENLLLTSDGHIKIADFGSVKPM----------------------QDSQITVLPNAASD 206

  Fly   432 FYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAADLWAL 496
                                             .:..:|||||.||.||||.:.|.|...|||||
plant   207 ---------------------------------DKACTFVGTAAYVPPEVLNSSPATFGNDLWAL 238

  Fly   497 GCIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRVDPRDRLGAQDEFGY 561
            ||.:|||::|..||:.:::::||:.|:...:.||..|.:.|.||:.:||..:|..|.||..| ||
plant   239 GCTLYQMLSGTSPFKDASEWLIFQRIIARDIKFPNHFSEAARDLIDRLLDTEPSRRPGAGSE-GY 302

  Fly   562 YESIRAHPFFAGIDWQTLRQQTPPPIYP----YLPGVSQDEDFRSSYTVP--GDLEPGLDERQIS 620
            . :::.||||.|:||:.||.||||.:.|    ......:|:...|.:.:.  ||.....:|...:
plant   303 V-ALKRHPFFNGVDWKNLRSQTPPKLAPDPASQTASPERDDTHGSPWNLTHIGDSLATQNEGHSA 366

  Fly   621 RLLSAELGVGSSVAMPVKRSTAKNSFDLNDAEKLQRLEQQKTDKWHVFAD-GEVILKKGFVNKRK 684
            ...|:| ..||     :.|..:.:|||               .:|..|.: ||.:|....|.|.:
plant   367 PPTSSE-SSGS-----ITRLASIDSFD---------------SRWQQFLEPGESVLMISAVKKLQ 410

  Fly   685 GLFARKRMLLLTTGPRLIYIDPVQMIKKGEIPWSP---DLRAEYKNFKIFFVHTPNRTYYLDDPE 746
            .:.::|..|:||..|:|||:||.:::.||.|.||.   ||.....:...|.:.||.:....:|.:
plant   411 KITSKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLNVVVTSPSHFKICTPKKVLSFEDAK 475

  Fly   747 GYAIHWSEAIENMR 760
            ..|..|.:|||.::
plant   476 QRASVWKKAIETLQ 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdk1NP_001261183.1 STKc_PDK1 244..571 CDD:270733 114/326 (35%)
S_TKc 246..571 CDD:214567 113/324 (35%)
PH_PDK1 658..764 CDD:241293 33/107 (31%)
PDK1NP_568138.1 STKc_PDK1 42..311 CDD:270733 114/326 (35%)
PH_3 388..490 CDD:405303 33/102 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3676
eggNOG 1 0.900 - - E1_KOG0592
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37643
Inparanoid 1 1.050 288 1.000 Inparanoid score I844
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1157543at2759
OrthoFinder 1 1.000 - - FOG0001781
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101713
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1315
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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