DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk1 and AT4G13000

DIOPT Version :10

Sequence 1:NP_728471.2 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_193036.1 Gene:AT4G13000 / 826913 AraportID:AT4G13000 Length:372 Species:Arabidopsis thaliana


Alignment Length:361 Identity:100/361 - (27%)
Similarity:158/361 - (43%) Gaps:69/361 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 IGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKR---EREVMHQMTNVPGFVNLSCT 313
            :|.||..:|:|..  ...:..|:||..:..|..::.:|..||   |:.|:.:..: |.|..|...
plant    26 LGRGSKGVVFLVK--ADNKWLALKVILRESIESKKAKDEYKRISFEQGVLSRFDH-PLFPRLHGV 87

  Fly   314 FQDQRSLYFVMTYARKGDMLPYINRVGS--FDVACTRHYAAELLLACEHMHRRNVVHRDLKPENI 376
            ....:.:.:.:.|....|:.....:...  |.....|.|||||::|.|::|.:.:|:|||||:|:
plant    88 ISTDKVIGYAIDYCPGRDLNSLRKKQSEEMFSDEIIRFYAAELVIALEYLHNQGIVYRDLKPDNV 152

  Fly   377 LLDEDMHTLIADF----------------GSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRL 425
            ::.|:.|.::.||                .|.::.||.::..:....|....|....||..|...
plant   153 MIQENGHLMLVDFDLSTNLPPRTPQSSFSSSPRLSTATKKERSIFAFSGLCNSGISPDDSVSRSS 217

  Fly   426 ENEDEDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPA 490
            |:|                                 ::..:..|||||.:||:|||:.......|
plant   218 ESE---------------------------------FSGEKSNSFVGTEEYVAPEVITGSGHDFA 249

  Fly   491 ADLWALGCIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQ--GFDKDAEDLVRKLLRVDPRDRL 553
            .|.|:||.::|:|:.|..||||||....|.:||   .:.|.  |......|||||||..||..|:
plant   250 VDWWSLGVVLYEMLYGATPFRGSNRKETFLKIL---TEPPSLVGETTSLRDLVRKLLEKDPSRRI 311

  Fly   554 GAQDEFGYYESIRAHPFFAGIDWQTLRQQTPPPIYP 589
            ..       |.|:.|.||.|:||..:.:.:.||..|
plant   312 NV-------EGIKGHDFFKGLDWDLVLKVSRPPYIP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdk1NP_728471.2 STKc_PDK1 244..571 CDD:270733 92/341 (27%)
PH_PDK1 658..764 CDD:241293
AT4G13000NP_193036.1 Protein Kinases, catalytic domain 18..342 CDD:473864 100/361 (28%)
Blue background indicates that the domain is not in the aligned region.

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