DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdk1 and AT3G10540

DIOPT Version :9

Sequence 1:NP_001261183.1 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_187665.2 Gene:AT3G10540 / 820219 AraportID:AT3G10540 Length:486 Species:Arabidopsis thaliana


Alignment Length:533 Identity:175/533 - (32%)
Similarity:249/533 - (46%) Gaps:107/533 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 NDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKREREVMHQMTNVPGFV 308
            :||..|:..|.||||.|..|....:...||:|:.:|:.|.:|.|..|:|.||.|:.|:.: ||.|
plant    43 HDFELGKIYGVGSYSKVVRAKKKDNGTVYALKIMDKKFITKENKTAYVKLERIVLDQLEH-PGIV 106

  Fly   309 NLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLACEHMHRRNVVHRDLKP 373
            .|..||||.:|||..:.....|::...|.|.|.......|.|:||::.|.|::|...::|||:||
plant   107 KLFFTFQDTQSLYMALESCEGGELFDQITRKGRLSEDEARFYSAEVVDALEYIHNMGLIHRDIKP 171

  Fly   374 ENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLENEDEDFYDRDSE 438
            ||:||..|.|..||||||.|.|                      .|.....|.|...|       
plant   172 ENLLLTLDGHIKIADFGSVKPM----------------------QDSQITVLPNAASD------- 207

  Fly   439 ELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAADLWALGCIVYQM 503
                                      .:..:|||||.||.||||.:.|.|...|||||||.:|||
plant   208 --------------------------DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 246

  Fly   504 IAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRVDPRDRLGAQDEFGYYESIRAH 568
            ::|..||:.:::::||:.|:...:.||..|.:.|.||:.:||..||..|.||..|  .|:|::.|
plant   247 LSGTSPFKDASEWLIFQRIIARDIKFPNHFSEAARDLIDRLLDTDPSRRPGAGSE--GYDSLKRH 309

  Fly   569 PFFAGIDWQTLRQQTPPPIYPYLPGVSQDEDFRSSYTVP----------GDLEPGLDER--QISR 621
            |||.|:||:.||.||||.:.|.....|...:...|...|          .|...||.|.  .|:|
plant   310 PFFKGVDWKNLRSQTPPKLAPDPASQSASPERDGSPWNPTHVGDTSVLQNDGHNGLSESSGSITR 374

  Fly   622 LLSAELGVGSSVAMPVKRSTAKNSFDLNDAEKLQRLEQQKTDKWHVFAD-GEVILKKGFVNKRKG 685
            |.|.:                  |||               .:|..|.: ||.:|....|.|.:.
plant   375 LASID------------------SFD---------------SRWQQFLEPGESVLMISAVKKLQK 406

  Fly   686 LFARKRMLLLTTGPRLIYIDPVQMIKKGEIPWSP---DLRAEYKNFKIFFVHTPNRTYYLDDPEG 747
            :.::|..|:||..|||||:||.:::.||.|.||.   ||..:..:...|.:.||.:....:|.:.
plant   407 ITSKKVQLILTNKPRLIYVDPSKLVVKGNIIWSDNSNDLNVQVSSPSHFKICTPKKVLSFEDAKQ 471

  Fly   748 YAIHWSEAIENMR 760
            .|:.|.:|||.::
plant   472 RALQWKKAIETLQ 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdk1NP_001261183.1 STKc_PDK1 244..571 CDD:270733 115/326 (35%)
S_TKc 246..571 CDD:214567 114/324 (35%)
PH_PDK1 658..764 CDD:241293 34/107 (32%)
AT3G10540NP_187665.2 STKc_PDK1 43..312 CDD:270733 115/326 (35%)
S_TKc 45..312 CDD:214567 114/324 (35%)
PH_3 383..486 CDD:291269 34/102 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3676
eggNOG 1 0.900 - - E1_KOG0592
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37643
Inparanoid 1 1.050 288 1.000 Inparanoid score I844
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1157543at2759
OrthoFinder 1 1.000 - - FOG0001781
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101713
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1315
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

Return to query results.
Submit another query.