DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk1 and aPKC

DIOPT Version :9

Sequence 1:NP_001261183.1 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:645 Identity:145/645 - (22%)
Similarity:242/645 - (37%) Gaps:176/645 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LPGSGASGIAAAAVITVASDCGENCSSNGTEHQQHFN----------------IATTTATSATEA 80
            |.|.|...||..::...:|..|...:.:|..|||:.:                :....|.|:.:.
  Fly   380 LNGCGGGSIAGGSIGGRSSVLGTIHNGHGHHHQQYHHECIHYERLPIPVPIPTVPMGVAPSSQQM 444

  Fly    81 TMPAMAKEK----ASATVSLGESNFRDINLKDLAVVVEAASRLHHQQNVCGCGAVSSTENNNNSR 141
            :...:..|:    |.|||      |.::                .|.....|.....:.....:|
  Fly   445 SQHQLQSEEEIEPAYATV------FPNV----------------PQAPGLSCDGEDRSIYRRGAR 487

  Fly   142 YGSSKYLTNGHTSPLAAAVASNSSSVATTPHCRMLHNCSLQQYQNDI----RQQTEILDMLRQQH 202
            .....|..|||...     |...:..|...:|           |:.|    ||..:.:......|
  Fly   488 RWRKLYRVNGHIFQ-----AKRFNRRAFCAYC-----------QDRIWGLGRQGFKCIQCKLLVH 536

  Fly   203 QQGYQSQQQ----QQQPQQQQEQQQQQE---------------------QSQQQQQLQNPAPRRS 242
            ::.::..|:    |.:|..::..::..:                     ::.....:..|.|...
  Fly   537 KKCHKLVQKHCTDQPEPLVKERAEESSDPIPVPLPPLPYEAMSGGAEACETHDHAHIVAPPPPED 601

  Fly   243 P-----------NDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKRERE 296
            |           |||...|.||.|||:.|.:.....:||.||:||.:|.|:..:...|:::.|:.
  Fly   602 PLEPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKH 666

  Fly   297 VMHQMTNVPGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLACEHM 361
            |....:|.|..|.|...||....|:||:.:.|.||::.::.|.........|.||||:.||...:
  Fly   667 VFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFL 731

  Fly   362 HRRNVVHRDLKPENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLE 426
            |.:.:::||||.:|:|||.:.|..:.|:|..|                                 
  Fly   732 HEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCK--------------------------------- 763

  Fly   427 NEDEDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAA 491
                       |.:..||                     ..::|.||..|::||:|:......:.
  Fly   764 -----------EGIRPGD---------------------TTSTFCGTPNYIAPEILRGEDYGFSV 796

  Fly   492 DLWALGCIVYQMIAGLPPF----------RGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLR 546
            |.||||.::|:|:||..||          :.:.|| :|:.||:..:..|:.....|..:::..|.
  Fly   797 DWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDY-LFQVILEKTIRIPRSLSVRAASVLKGFLN 860

  Fly   547 VDPRDRLGAQDEFGYYESIRAHPFFAGIDWQTL-RQQTPPPIYPYLPGVSQDEDFRSSYT 605
            .:|.||||...|..:.: |.:||||..:||:.| |:|..||..|.|.......:|...:|
  Fly   861 KNPADRLGCHRESAFMD-IVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFT 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdk1NP_001261183.1 STKc_PDK1 244..571 CDD:270733 92/336 (27%)
S_TKc 246..571 CDD:214567 90/334 (27%)
PH_PDK1 658..764 CDD:241293
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 10/67 (15%)
S_TKc 616..884 CDD:214567 90/334 (27%)
STKc_aPKC 620..947 CDD:270740 102/367 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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