DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk1 and pdk-1

DIOPT Version :9

Sequence 1:NP_001261183.1 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001024743.1 Gene:pdk-1 / 180475 WormBaseID:WBGene00003965 Length:636 Species:Caenorhabditis elegans


Alignment Length:555 Identity:196/555 - (35%)
Similarity:312/555 - (56%) Gaps:67/555 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 QQLQNPAPRRSPNDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKRERE 296
            :.::...|:|:.|||:|.:.:|||:||.|:...::.:...:|:||.:|..:.|.:|.|.|.||:.
 Worm    55 KSIKEGCPKRTSNDFMFLQSMGEGAYSQVFRCREVATDAMFAVKVLQKSYLNRHQKMDAIIREKN 119

  Fly   297 VMHQMTNVPG---FV-NLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLA 357
            ::..::...|   || .|...|.||..:|||:.....||:...:...||||:..::.:|:|:|..
 Worm   120 ILTYLSQECGGHPFVTQLYTHFHDQARIYFVIGLVENGDLGESLCHFGSFDMLTSKFFASEILTG 184

  Fly   358 CEHMHRRNVVHRDLKPENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDS 422
            .:.:|...:||||:||:|:|:.:|.|.||.|||||:.....:  |:.|..::..:::|...|..|
 Worm   185 LQFLHDNKIVHRDMKPDNVLIQKDGHILITDFGSAQAFGGLQ--LSQEGFTDANQASSRSSDSGS 247

  Fly   423 DRLENEDEDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPI 487
            .    ....||          .||:..||           |..|:.:|||||.|||||:|.:|.:
 Worm   248 P----PPTRFY----------SDEEVPEE-----------NTARRTTFVGTALYVSPEMLADGDV 287

  Fly   488 TPAADLWALGCIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRVDPRDR 552
            .|..|:|.||||::|.:||.||||..|.|.:.|.|.:....||:||.::|.:::.|:|..||..|
 Worm   288 GPQTDIWGLGCILFQCLAGQPPFRAVNQYHLLKRIQELDFSFPEGFPEEASEIIAKILVRDPSTR 352

  Fly   553 LGAQDEFGYYESIRAHPFFAGIDWQTLRQQTPPPIYPYLPGVSQDEDFRSSYTVPGDLEPGLDER 617
            :.:|:       :.||.||..:||..:....||.::.|:|....:.::   |:..|.:|||||:|
 Worm   353 ITSQE-------LMAHKFFENVDWVNIANIKPPVLHAYIPATFGEPEY---YSNIGPVEPGLDDR 407

  Fly   618 QISRLLSAELGVGSSVAMPVKRST--------------------AKNSFDLNDAEKLQRLEQQKT 662
            .:.||::  ||..:|.:.|   ||                    |.:..:.|.|.:.|:||:|:.
 Worm   408 ALFRLMN--LGNDASASQP---STFRPSNVEHRGDPFVSEIAPRANSEAEKNRAARAQKLEEQRV 467

  Fly   663 -DKWHVFADGEVILKKGFVNKRKGLFARKRMLLLTTGPRLIYIDPVQMIKKGEIPWSPDLRAEYK 726
             :.:|:|.:..:|||:|::.|::|||||:||.|||.||.|:|||...::.|||:||:|.::.|.|
 Worm   468 KNPFHIFTNNSLILKQGYLEKKRGLFARRRMFLLTEGPHLLYIDVPNLVLKGEVPWTPCMQVELK 532

  Fly   727 NFKIFFVHTPNRTYYLDDPEGYAIHWSEAIENMRK 761
            |...||:|||||.|||.|.|..|..|.:||.::||
 Worm   533 NSGTFFIHTPNRVYYLFDLEKKADEWCKAINDVRK 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdk1NP_001261183.1 STKc_PDK1 244..571 CDD:270733 113/330 (34%)
S_TKc 246..571 CDD:214567 111/328 (34%)
PH_PDK1 658..764 CDD:241293 52/105 (50%)
pdk-1NP_001024743.1 STKc_PDK1 67..364 CDD:270733 113/330 (34%)
S_TKc 69..364 CDD:214567 111/328 (34%)
PH_PDK1 464..570 CDD:241293 51/104 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157460
Domainoid 1 1.000 116 1.000 Domainoid score I3765
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37643
Inparanoid 1 1.050 348 1.000 Inparanoid score I1358
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1157543at2759
OrthoFinder 1 1.000 - - FOG0001781
OrthoInspector 1 1.000 - - oto19865
orthoMCL 1 0.900 - - OOG6_101713
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2717
SonicParanoid 1 1.000 - - X1315
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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