DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk1 and prkcab

DIOPT Version :10

Sequence 1:NP_728471.2 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster
Sequence 2:XP_009298084.1 Gene:prkcab / 100333967 ZFINID:ZDB-GENE-131121-412 Length:681 Species:Danio rerio


Alignment Length:366 Identity:106/366 - (28%)
Similarity:166/366 - (45%) Gaps:75/366 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 NDFIFGRYIGEGSYSIVYLAVDIHSRRE-YAIKVCEKRLILRERKQDYIKREREVMHQMTNVPGF 307
            |||.|...:|:||:..|.|| ::.|..| ||||:.:|.:::::...:....|:.|:.|....|..
Zfish   345 NDFHFLALLGKGSFGKVMLA-EMKSTEELYAIKILKKDVVIQDDDVECTMVEKRVLAQREKPPFL 408

  Fly   308 VNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLACEHMHRRNVVHRDLK 372
            ..|...||....|||||.|...||::.:|.:||.|.......||||:.:....:||:.:::||||
Zfish   409 TQLHSCFQTVDRLYFVMEYINGGDLMYHIQQVGKFKEPQAVFYAAEIAVGLFFLHRKGIIYRDLK 473

  Fly   373 PENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLENEDEDFYDRDS 437
            .:|::||.:.|..|||||..|                                ||..|....|  
Zfish   474 LDNVMLDSEGHIKIADFGMCK--------------------------------ENMYEGMTTR-- 504

  Fly   438 EELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAADLWALGCIVYQ 502
                                           :|.||..|::||::...|...:.|.||.|.::|:
Zfish   505 -------------------------------TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 538

  Fly   503 MIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRVDPRDRL--GAQDEFGYYESI 565
            |:||.|||.|.::..:|:.|::..|.:|:...|:|..:.:.|:...|..||  ||:.|    ..|
Zfish   539 MLAGQPPFDGEDEDELFQSIMEHNVSYPKSLTKEAVSICKGLMTKHPSKRLGCGAEGE----RDI 599

  Fly   566 RAHPFFAGIDWQTL-RQQTPPPIYPYLPGVSQDEDFRSSYT 605
            :...||..|||..| .::..||..|.:.|.:. |:|...:|
Zfish   600 KEQAFFRRIDWDRLANREIQPPFKPKVCGKAA-ENFDKFFT 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdk1NP_728471.2 STKc_PDK1 244..571 CDD:270733 93/329 (28%)
PH_PDK1 658..764 CDD:241293
prkcabXP_009298084.1 C1_cPKC_rpt1 33..90 CDD:410383
C1_cPKC_rpt2 100..153 CDD:410386
C2_PKC_alpha_gamma 157..287 CDD:175992
STKc_cPKC 350..668 CDD:270739 102/361 (28%)
Blue background indicates that the domain is not in the aligned region.

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