DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lsp1gamma and Fbp1

DIOPT Version :9

Sequence 1:NP_523868.1 Gene:Lsp1gamma / 38015 FlyBaseID:FBgn0002564 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_524065.1 Gene:Fbp1 / 39566 FlyBaseID:FBgn0000639 Length:1029 Species:Drosophila melanogaster


Alignment Length:1076 Identity:206/1076 - (19%)
Similarity:355/1076 - (32%) Gaps:381/1076 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLTLVILALVACVTA---FSVPTQKVKIADKNFLEK---QKFLFEIVHRIDEPLMFEEWIKMGQ 59
            |...::::|..|.|.|   .:....:|:..|:..||.   |||:.:||..|.:||...|.|.:..
  Fly     1 MNRIMLLVAFAAGVVAAGRITTNQDRVQGIDRMSLEDLQLQKFILDIVQNIRQPLQQSELINLDV 65

  Fly    60 KLITDKAQYE-TFDFYMEKLWESYKLGALLPKGEFFGALVKTHHKQAYGLFNFFYYAKDWETFVR 123
            .||.|..:|. ..|..|..:.:..:...||.:.:.:......|.:|..|::.....|:|::|..|
  Fly    66 GLIADSQRYRGGIDKVMHNVIDLDRQRRLLDEHQVYSVGRLEHVQQLRGIYRLLARAQDFDTLRR 130

  Fly   124 NVAWARIHVNEGMFVYALTLAVIHKPEFEGLILPQIYEIFPQYFFNSKFVYAA------------ 176
            ||.:.|.::|..:.|.||.||:..:.:.:.||:|.:.|:.|:.:.:.:.:...            
  Fly   131 NVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELYLDEEVIQQVRSVLREQTQRPS 195

  Fly   177 ----------------------------------------------------------------- 176
                                                                             
  Fly   196 LMDIVGMRQRAMNPVMSILMPWREIHMQMALRKQQNIQNVLGQKRVVVRAENQGQVEGTSLLTDD 260

  Fly   177 ---EKFDYEVFSKLTMYEK-------------------------EYKD----------------- 196
               :.|...:..:|.:.|.                         :|:|                 
  Fly   261 IELQNFVQNLIQELALLEDVTQLEQSQLINNDQREEQWVGRQRVQYQDNNQERDLGQDVDTGRLL 325

  Fly   197 -----ILYKDYSEFTG-NFYFYTKDWKTWQWYKMMGLDQEWYVED----------KYFLRENLSQ 245
                 .|.:...|:.| |.|...||    ::.:::..|.:....|          :..|:..:||
  Fly   326 RVSRRRLLEQQDEYQGQNIYGNQKD----RFQRLLRRDDDNDDNDDDDDQDIRMGRVQLQRGISQ 386

  Fly   246 --------------FVNDPKYV----------------DVVKGLKKFYMPVDYTR--------DI 272
                          .||..:.:                |.:.|.::|...|...|        .:
  Fly   387 GGLRIGGAHNLPTVSVNSDRLLHVSRRRLNAIQQDQQQDQLNGRQRFMGLVRGDRLSEGRRVGQL 451

  Fly   273 DFFNDETKMTYFTEDLGWNAYWYYLNMDYAFFLNGKQFGLDKDR--------------------- 316
            |....|.:..:..:|       |.|.       .|:.||:.::|                     
  Fly   452 DDVRQERQNNWQKQD-------YILT-------QGRTFGVQQERQNYADQLESVSRDDERLVHIN 502

  Fly   317 ----------------------------------------------RG----------------- 318
                                                          ||                 
  Fly   503 RRRLNQDNQDIQQQQMHFPRRINSIGEGRRVMGERPIQDEDILKLIRGENRLKLMTDDEILEMLQ 567

  Fly   319 ------------------------------------------------EYWIYNVQQILARYYQE 335
                                                            |..::|::|::||..||
  Fly   568 RNRQQRLQKHQNDDDDDVNDDDVNVVHRQGLRSRRSLPNLRQQNNRLSEIVLHNLRQLVARLNQE 632

  Fly   336 RLANGFGEIPEFFWYKQIEYGYDPQLIYYNGIGYSYRKNYYDFYTYGKFEMYSQIQNFFSRVY-- 398
            .:|.  |::.|    :|.:...:|:|.  ....|:.|.|.....:....::.:||.....|:.  
  Fly   633 SIAQ--GQLIE----EQQQLINNPRLT--QSERYALRLNQIRINSQRSRQVLAQIGQIEQRIQEV 689

  Fly   399 --KVLETGFYKTADGQVFDLHKPEAI---KIVGNYLQGNADTFDKYFFNYYYLLAHMYFADVDYN 458
              :||......:..|||.|..:.|::   .::|...|....|..:..              |..|
  Fly   690 IGQVLNQVNVNSLRGQVIDQRQVESLIADVLLGRLGQVGIMTIIRQV--------------VQDN 740

  Fly   459 DMEVFPNVFLNFETMLRDPFF-YTFYKKFTDVFYTFKYYLKPYTQKDLFYEGITIKDVSVSKLVT 522
            ::|......|...  |.||.. ||..:....|....:..|..|.|:.|...|::|.||.|.||.|
  Fly   741 NIEQIDRTGLGIR--LSDPVVQYTLRRIVRIVDEQREQILGGYRQEQLQMRGVSINDVRVDKLRT 803

  Fly   523 YYDIVDFDVTNLLNDKMTFVDGQYIWDKALLARQARLNHKPFNFEFTIDSDKVQKGVVRVFLGPK 587
            ..:..:.|::||:..::..:      .:.::.||.|||:|.|..:..|.||:.|..::|:||||.
  Fly   804 RIEEHELDLSNLVEQQVQGI------QQEIVGRQRRLNNKAFTIDMDITSDQDQDAIIRIFLGPA 862

  Fly   588 FDEYGRV-IPLDYNRKNFVQIDSFVYPFIAGTNTIKRSSKEFSWTAEDRITYTELYKYVMLASEG 651
            .|:.||. ..||..|::||.:|:.......|.|.|.|.|.:..||..|.....|:|:.|||..:|
  Fly   863 EDQQGRQGASLDERRRDFVLLDAIQVQLENGRNRIHRRSIDIPWTTSDVTPLVEIYRQVMLQLKG 927

  Fly   652 KYDFPL----DISEPHNAFPDRLVLPKGWEQGMPMQFYFFVSPFAETYEQFSNFDYTYSSGVGSG 712
            :....:    .:...:..||..|:||:|..:|:|||....|||..|.  |..:.....:.|:||.
  Fly   928 QQAQQVVGIQQLVGENGRFPQHLLLPRGRPEGLPMQLLVVVSPLVEL--QVQDVVPAITIGIGSA 990

  Fly   713 TRFVDTKPFGYPFDRQI-DESDFF-VPNGFFKDVKV 746
            : ..|.:|.|||.||.| :|.:.. :.|...:||.:
  Fly   991 S-LRDARPLGYPLDRPIHNEQELLQLTNVLLQDVVI 1025

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1gammaNP_523868.1 Hemocyanin_N 31..153 CDD:397678 36/125 (29%)
Hemocyanin_M 159..490 CDD:395296 75/646 (12%)
Hemocyanin_C 499..747 CDD:397679 83/255 (33%)
Fbp1NP_524065.1 Hemocyanin_N 38..159 CDD:281684 34/120 (28%)
Hemocyanin_C 781..1025 CDD:281685 83/252 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470651
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.