DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp1gamma and PPO1

DIOPT Version :9

Sequence 1:NP_523868.1 Gene:Lsp1gamma / 38015 FlyBaseID:FBgn0002564 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster


Alignment Length:738 Identity:180/738 - (24%)
Similarity:298/738 - (40%) Gaps:200/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KLGALLPKGEFFGALVKTHHKQ-AYGLFNFFYYAKDWETFVRNVAWARIHVNEGMFVYALTLAVI 146
            |:|.   |.:|  :|....|:: |..|...|..|.:...||....:.:..||..:|.||..:||.
  Fly    77 KIGL---KNQF--SLFNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVA 136

  Fly   147 HKPEFEGLILPQIYEIFPQYFFNSKFVYAAEKFDYEVFSKLTMYEKEYKDILYKDYSEFTGNFYF 211
            |:|:...:.:..|.:|||     |.||                           :.|.|      
  Fly   137 HRPDTR
EVPITNISQIFP-----SNFV---------------------------EPSAF------ 163

  Fly   212 YTKDWKTWQWYKMMGLDQEWYVEDKYFLRENLSQFVNDPKYVDVVKGLKKFYMPVDYT---RDID 273
              :|.:           ||..|..:...|          .:||:         |.:||   |:  
  Fly   164 --RDAR-----------QEASVIGESGAR----------VHVDI---------PQNYTASDRE-- 194

  Fly   274 FFNDETKMTYFTEDLGWNAYWYYLNMDYAFFLNGKQFGLDKDRRGEYWIYNVQQILARYYQERLA 338
               ||.::.||.||:|.|::.::.::.|.  ..|....::||||||.:.|...||||||..||..
  Fly   195 ---DEQRLAYFREDIGVNSHHWHWHLVYP--TTGPTEVVNKDRRGELFYYMHHQILARYNVERFC 254

  Fly   339 NGFG----------EIPEFFWYKQIEYGYDPQLI-YYNGIGYSYR---KNYYDFYTY-GKFEMYS 388
            |...          |:||         ||.|::: ..|...|..|   :...|...: |:.|: |
  Fly   255 NNLKKVQPLNNLRVEVPE---------GYFPKILSSTNNRTYPARVTNQKLRDVDRHDGRVEI-S 309

  Fly   389 QIQNFFSRVYKVLETGFYKTADGQVFDLHKPEAIKIVGNYLQGNADTFDKYFFNYYYLLAH---- 449
            .::.:..||...::.|:.:.:.|....|.:...|.|:||.::.:......|  |:|..|.:    
  Fly   310 DVERWRDRVLAAIDQGYVEDSSGNRIPLDEVRGIDILGNMIEASPVLSINY--NFYGNLHNEGHN 372

  Fly   450 -MYFA-DVDYNDMEVFPNVFLNFETMLRDPFFYTFYKKFTDVFYTFKYYLKPYTQKDLFYEGITI 512
             :.|| |.||..:|.| .|..:..|.:|||.||.::.....||..||..|.||...:|.::|||:
  Fly   373 IISFAHDPDYRHLEEF-GVMGDVTTAMRDPIFYRWHGFIDTVF
NKFKTRLNPYNAGELNFDGITV 436

  Fly   513 ---------KDVSVSKLVTYY-----DI---VDFDVTNLLNDKMTFVDGQYIWDKALLARQARLN 560
                     .:...:.|:||:     |:   :||..|.               |:.:.|....|.
  Fly   437 DYIEAKIGKSNTKANTLLTYWQKSSADLAAGLDFGPTT---------------DRNIFASFTHLQ 486

  Fly   561 HKPFNFEFTIDSDKVQK-GVVRVFLGPKFDEYGRVIPLDYNRKNFVQIDSFVYPFIAGTNTIKRS 624
            :.||.:.|.:.::..:: |..|:|:.||.||..:.:.|:..|...:::|.|....:.|.|||:|.
  Fly   487 NAPFTYTFNVTNNGARRTGTCRIFICPKVDERNQALNLEEQRLLAIEMDKFTVDLVPGENTIRRQ 551

  Fly   625 SKEFSWTAEDRITYTELYKYVMLASEGKY-----DFPLDISEPHNA------------FPDRLVL 672
            |.|.|               |.:..|..:     |:     :|..|            :|..|:|
  Fly   552 STESS---------------VAIPFERSFRPVGADY-----QPKAADELARFKFCGCGWPQHLLL 596

  Fly   673 PKGWEQGMPMQFYFFVSPFA-ETYEQFSNFDYTYSSGVG-SGTR---FVDTKPFGYPFDRQIDES 732
            |||..|||....:..:|.:: ::.||....:...|:... .|.:   :.|.:..||||||::..:
  Fly   597 PKGNAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYSFCGLKDKLYPDRRTMGYPFDRRLPNA 661

  Fly   733 DFFVPNGFF-----KDVKVYYVD 750
            :.....|.|     .|:::.:.|
  Fly   662 NLTELVGAFGNMAKTDLRIVFND 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1gammaNP_523868.1 Hemocyanin_N 31..153 CDD:397678 21/70 (30%)
Hemocyanin_M 159..490 CDD:395296 86/354 (24%)
Hemocyanin_C 499..747 CDD:397679 67/292 (23%)
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:281684 21/69 (30%)
Hemocyanin_M 152..414 CDD:278784 85/351 (24%)
Hemocyanin_C 423..682 CDD:281685 67/293 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470660
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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