DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and STP4

DIOPT Version :9

Sequence 1:NP_001261181.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_010235.1 Gene:STP4 / 851512 SGDID:S000002206 Length:490 Species:Saccharomyces cerevisiae


Alignment Length:350 Identity:75/350 - (21%)
Similarity:114/350 - (32%) Gaps:88/350 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HLDRSMSLSPPM----------SANTSATSAAAIYPAMGLQQAAAASAFGMLS-----------P 70
            |...|:..:||.          :|:.:.|....|.|::.|..:..:|:...||           .
Yeast    17 HETMSLRRNPPFIDTPEKMPNPTASPNGTIHHLIDPSLPLLSSTTSSSRSTLSSTLNSPPPPPLT 81

  Fly    71 TQLLAANRQAAAFMAQLPMSTLANTLFPHNPAALFGAWAAQQSLPPQGTHLHSPPASPHSPLSTP 135
            |...:.|..|...:...|..   ||...||....|                      |||...||
Yeast    82 TSYSSYNSSACQSITSSPTD---NTALAHNSKCYF----------------------PHSLSPTP 121

  Fly   136 LGSGKH------PLNSPNSTPQHHEPAKKARKLSVKKEFQTEISMSVNDMY----------HTSG 184
            |.|...      |::|..:.....|.....|..|:...|.:.:..:|.|.:          :|:|
Yeast   122 LSSNSSSHVILPPISSFTNLITVAEREFNGRSNSLHANFTSPVPRTVLDHHRHELTFCNPNNTTG 186

  Fly   185 GPISPPSSGSSPNSTHDGAGGNAGCVGVSKDPSRDKSFTCKICSRSFGYKHVL---QNHERTHTG 246
            .....|    ||.:.|......|    |...| |.||.:....|   |:..::   |..::.::.
Yeast   187 FKTITP----SPPTQHQSILPTA----VDNVP-RSKSVSSLPVS---GFPPLIVKQQQQQQLNSS 239

  Fly   247 EKPFECPECHKRFTRDH------HLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVH--TGE 303
            ......|..|...|.:|      .||...::....|...|..|...:   |||..|...|  ..:
Yeast   240 SSASALPSIHSPLTNEHTSRYSSSLKDSAKITKQRKKKECPICHNFY---ANLSTHKSTHLTPED 301

  Fly   304 RPYTCEICDGKFSDSNQLKSHMLVH 328
            ||:.|.||...|:.:|.|..|...|
Yeast   302 RPHKCPICQRGFARNNDLIRHKKRH 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_001261181.1 C2H2 Zn finger 224..244 CDD:275368 3/22 (14%)
zf-H2C2_2 237..261 CDD:290200 3/26 (12%)
C2H2 Zn finger 252..272 CDD:275368 6/25 (24%)
zf-H2C2_2 264..289 CDD:290200 5/24 (21%)
C2H2 Zn finger 280..300 CDD:275368 6/19 (32%)
zf-H2C2_2 292..316 CDD:290200 9/25 (36%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
zf-H2C2_2 321..345 CDD:290200 2/7 (29%)
C2H2 Zn finger 336..352 CDD:275368
STP4NP_010235.1 COG5048 14..442 CDD:227381 74/349 (21%)
C2H2 Zn finger 279..296 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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