DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and AT3G29340

DIOPT Version :10

Sequence 1:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:249 Identity:48/249 - (19%)
Similarity:69/249 - (27%) Gaps:105/249 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 EISMSVNDMYHTSGGPISPPSSGSSPNSTHDGAGGNAGCVGVSKDPSRDKSFTCKICSRSFGYKH 235
            |:.:.:.:|...||...|...|               |.:.:..:.....|..||||.:||....
plant     7 ELLLDLREMVSQSGFEKSTTCS---------------GVIALRSNLQSKSSHKCKICGKSFECYQ 56

  Fly   236 VLQNHERTH---------------------------TGEKPFECPECHKRFTRDHHLKTHMRLHT 273
            .|..|:|.|                           :....:||..|.|.|.....|..|.:||.
plant    57 ALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHR 121

  Fly   274 G-----------------------------------EKPYHCSHCDRQFVQVANLRRHLRVHTGE 303
            .                                   ||..||....:.|.:..:       |:|.
plant   122 STKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLS-------HSGA 179

  Fly   304 RPYT----------------CEICDGKFSDSNQLKSHMLVH---NGEKPFECER 338
            .|.|                |:||...|..|..|.:|..||   :|:  ..|:|
plant   180 LPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGK--LACKR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_523867.1 SFP1 <212..324 CDD:227516 35/189 (19%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
zf-H2C2_2 237..261 CDD:463886 9/50 (18%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
zf-H2C2_2 264..289 CDD:463886 9/59 (15%)
C2H2 Zn finger 280..300 CDD:275368 2/19 (11%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
zf-H2C2_2 321..345 CDD:463886 7/21 (33%)
C2H2 Zn finger 336..352 CDD:275368 2/3 (67%)
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:433576 10/24 (42%)
C2H2 Zn finger 45..65 CDD:275368 9/19 (47%)
zf-C2H2_6 98..122 CDD:433576 9/23 (39%)
C2H2 Zn finger 100..120 CDD:275368 6/19 (32%)

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