DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kr and sens

DIOPT Version :9

Sequence 1:NP_001261181.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster


Alignment Length:552 Identity:114/552 - (20%)
Similarity:166/552 - (30%) Gaps:243/552 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSPPMSANTSATSAAAI---YPAMGLQQAAAASAFGMLSPTQLLAANRQAAAFMAQ------LPM 89
            ||||.|.::...|.|.:   ..|:..|....||||           |...|:..||      || 
  Fly     4 LSPPPSPHSQQPSPAGLGCHGAALDKQWMQRASAF-----------NTVIASAAAQKLNGRDLP- 56

  Fly    90 STLANTLFPHNPAALFGAWAAQQSLPPQGTHLHSP--PASPHSPLSTPLG----------SGKHP 142
                   |.:||.....|....|.|....|.|.:|  |.:|.||.|..||          ..:|.
  Fly    57 -------FLYNPLLYSSALLWPQFLLSSATALGTPLTPMTPKSPASVVLGQRDRDFALTPEKEHE 114

  Fly   143 L----NSPNSTPQHHEPAK-KARKLSVKKEFQTEISMSVNDMYHTSGG----------------- 185
            |    |:.||...:.|..: ....||.|:...::.|.  .|.||:|..                 
  Fly   115 LQMNNNNENSKQDYQEQDEDMPLNLSTKERITSDDSN--RDQYHSSSNNSSRSSSSSEVEQLHPM 177

  Fly   186 ---PISPP-------SSGSSPNSTHDGAGGN---------------------------------- 206
               .::||       .|.|:|......:.||                                  
  Fly   178 TSLNVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQYGLKMEEQGDEEEHQVD 242

  Fly   207 -----------------------------------------------------AGCVG------- 211
                                                                 ||..|       
  Fly   243 PIVRKFKYERRTASISSLQSPISSLSAPASNAVQDLEFEVAQQQLYAHRSAFMAGLTGNNLELLT 307

  Fly   212 -----VSKDPSRDK-----------------SFTCKICSRSFGY----------------KHVLQ 238
                 .|:.|.:.:                 :....:.:..|||                .|..|
  Fly   308 QHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAEFGYMRNQHQQPQQQQQQQLHHQQQ 372

  Fly   239 NHERTHTGEKP-----------------------------FECPECHKRFTRDHHLKTHMRLHTG 274
            ..:..|..:.|                             |:|.:|.|.|.|...|.||:.:|:.
  Fly   373 PQQHQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHSD 437

  Fly   275 EKPYHCSHCDRQFVQVANLRRHLRVHTGERPYTCEICDGKFSDSNQLKSHMLVHNGEKPFECERC 339
            .:||.|.:|.::|.|.:::::|..:||||:|:.|.:|...||.|:.|.:||..|.|.|||.|..|
  Fly   438 TRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPFGCHLC 502

  Fly   340 HMKFR-----RRHHLMNHKCGIQSPPTPALSP 366
            ...|:     |||....|:   ::||...|.|
  Fly   503 DQSFQRKVDLRRHRESRHE---EAPPVEDLKP 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_001261181.1 C2H2 Zn finger 224..244 CDD:275368 5/35 (14%)
zf-H2C2_2 237..261 CDD:290200 8/52 (15%)
C2H2 Zn finger 252..272 CDD:275368 8/19 (42%)
zf-H2C2_2 264..289 CDD:290200 9/24 (38%)
C2H2 Zn finger 280..300 CDD:275368 5/19 (26%)
zf-H2C2_2 292..316 CDD:290200 8/23 (35%)
C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
zf-H2C2_2 321..345 CDD:290200 11/28 (39%)
C2H2 Zn finger 336..352 CDD:275368 6/20 (30%)
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 9/21 (43%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
COG5048 423..>497 CDD:227381 28/73 (38%)
zf-H2C2_2 428..452 CDD:290200 9/23 (39%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
zf-H2C2_2 455..480 CDD:290200 9/24 (38%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..516 CDD:275368 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 60 1.000 Inparanoid score I4014
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.150

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