DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and CG4730

DIOPT Version :10

Sequence 1:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:215 Identity:58/215 - (26%)
Similarity:86/215 - (40%) Gaps:41/215 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 PLNS-PNSTPQHHEPAKKARKLSVKKEFQTEISMSVNDMYHTSGGPISPPSSGSSPNSTHDGAGG 205
            |::| .:..|::....|...|. ..|||:....|:.:.|.|.:..|                   
  Fly   164 PIDSLEDIVPRNRHTGKSNCKF-CHKEFRNHSRMAKHQMIHLANRP------------------- 208

  Fly   206 NAGCVGVSKDPSRDKSFTCKICSRSFGYKHVLQNHERTHTGEKPFECPECHKRFTRDHHLKTHMR 270
                           :|.|..|.|.:..|..|:.|..:...:....|..|.|.|.....|:.|.|
  Fly   209 ---------------NFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIAKALEIHKR 258

  Fly   271 LHTGEKPYHCSHCDRQFVQVANLRRHLRV-HTGERPYTCEI--CDGKFSDSNQLKSHMLVHNGEK 332
            .|..:.||.|..|||:|.|.::|..|.:| |:|.| :.||.  |...|:.|:.|::|...|.. .
  Fly   259 YHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSR-FICEFPGCQKSFTSSSSLRNHECTHTA-M 321

  Fly   333 PFECERCHMKFRRRHHLMNH 352
            ||||..||..:..|:.|..|
  Fly   322 PFECAHCHQSYPARNKLRMH 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_523867.1 SFP1 <212..324 CDD:227516 35/114 (31%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
zf-H2C2_2 237..261 CDD:463886 6/23 (26%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
zf-H2C2_2 264..289 CDD:463886 11/24 (46%)
C2H2 Zn finger 280..300 CDD:275368 9/20 (45%)
C2H2 Zn finger 308..328 CDD:275368 7/21 (33%)
zf-H2C2_2 321..345 CDD:463886 9/23 (39%)
C2H2 Zn finger 336..352 CDD:275368 5/15 (33%)
CG4730NP_651413.1 zf-AD 46..124 CDD:462262
C2H2 Zn finger 183..203 CDD:275368 6/20 (30%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..289 CDD:275368 9/20 (45%)
C2H2 Zn finger 296..318 CDD:275368 7/21 (33%)
C2H2 Zn finger 325..346 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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