DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and CG11902

DIOPT Version :10

Sequence 1:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster


Alignment Length:169 Identity:63/169 - (37%)
Similarity:89/169 - (52%) Gaps:14/169 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 GPISPPSSGSSPNSTHDGAGGNAGCVGVSKDPSRDKSFTCKICSRSFGYKHVLQNHERTHTGEKP 249
            ||...||:..:||..            :|  |...|.|.|..|.::......|..|.|.||||||
  Fly  1246 GPDCKPSTAKTPNRP------------IS--PKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKP 1296

  Fly   250 FECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYTCEICDGK 314
            |:|..|...|.|...|:.|.|.||||:|:.|:.|.:.|.:...|::|:|:|:|||||.|..|:..
  Fly  1297 FKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKS 1361

  Fly   315 FSDSNQLKSHMLVHNGEKPFECERCHMKFRRRHHLMNHK 353
            |:.||.|..|:..|.||:|::|..|..:|.:...|.||:
  Fly  1362 FTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHR 1400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_523867.1 SFP1 <212..324 CDD:227516 46/111 (41%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
zf-H2C2_2 237..261 CDD:463886 13/23 (57%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
zf-H2C2_2 264..289 CDD:463886 11/24 (46%)
C2H2 Zn finger 280..300 CDD:275368 6/19 (32%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
zf-H2C2_2 321..345 CDD:463886 9/23 (39%)
C2H2 Zn finger 336..352 CDD:275368 4/15 (27%)
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368
C2H2 Zn finger 896..918 CDD:275368
C2H2 Zn finger 926..947 CDD:275368
C2H2 Zn finger 967..987 CDD:275368
C2H2 Zn finger 996..1016 CDD:275368
C2H2 Zn finger 1044..1063 CDD:275368
C2H2 Zn finger 1224..1244 CDD:275368
C2H2 Zn finger 1271..1291 CDD:275368 5/19 (26%)
zf-H2C2_2 1283..1306 CDD:463886 12/22 (55%)
C2H2 Zn finger 1299..1319 CDD:275368 7/19 (37%)
C2H2 Zn finger 1327..1347 CDD:275368 6/19 (32%)
zf-H2C2_2 1340..1364 CDD:463886 12/23 (52%)
SFP1 <1349..1405 CDD:227516 22/52 (42%)
C2H2 Zn finger 1355..1375 CDD:275368 7/19 (37%)
C2H2 Zn finger 1383..1401 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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