DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and Odj

DIOPT Version :10

Sequence 1:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster


Alignment Length:145 Identity:48/145 - (33%)
Similarity:71/145 - (48%) Gaps:10/145 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 PSRDKS---FTCKICSRSFGYKHVLQNHERTHTGEKPFECPECHKRFTRDHHLKTHMRL-HTGEK 276
            |..|:|   :.|..|..||.....:::|:..|..|| |.|.||.::|.....|:.|:|: |.|||
  Fly   198 PKVDRSIKRYVCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGRKFYTMPLLRLHIRVHHKGEK 261

  Fly   277 PYHCSHCDRQFVQVANLRRHLR-VHTGERPYTCEICDGKF-SDSNQLKSHMLVHNGEKP--FECE 337
            ||.|..|...|....:..||.| :|..|..:.|:||..:| |:..:|| |...|..::|  ..|.
  Fly   262 PYVCKFCGMGFANSPSRCRHERQMHANELVHPCKICGKRFNSEKGRLK-HEEGHKSDQPDVHICL 325

  Fly   338 RCHMKFRRRHHLMNH 352
            .|:.:|:....|..|
  Fly   326 TCNKEFKEAQFLHRH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_523867.1 SFP1 <212..324 CDD:227516 40/113 (35%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
zf-H2C2_2 237..261 CDD:463886 9/23 (39%)
C2H2 Zn finger 252..272 CDD:275368 7/20 (35%)
zf-H2C2_2 264..289 CDD:463886 12/25 (48%)
C2H2 Zn finger 280..300 CDD:275368 6/20 (30%)
C2H2 Zn finger 308..328 CDD:275368 8/20 (40%)
zf-H2C2_2 321..345 CDD:463886 8/25 (32%)
C2H2 Zn finger 336..352 CDD:275368 4/15 (27%)
OdjNP_650661.1 zf-AD 5..78 CDD:462262
C2H2 Zn finger 209..229 CDD:275368 5/19 (26%)
SUF4-like 212..>257 CDD:411020 15/45 (33%)
C2H2 Zn finger 212..229 CDD:411020 4/16 (25%)
C2H2 Zn finger 236..256 CDD:411020 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 249..274 CDD:463886 12/24 (50%)
C2H2 Zn finger 265..283 CDD:275368 5/17 (29%)
C2H2 Zn finger 298..314 CDD:275368 5/16 (31%)
zf-C2H2_jaz 322..347 CDD:432381 5/19 (26%)
C2H2 Zn finger 324..343 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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