DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and pita

DIOPT Version :10

Sequence 1:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:585 Identity:126/585 - (21%)
Similarity:198/585 - (33%) Gaps:208/585 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SLSPPMSANTSATSAAAIY--------PAMGLQQAAAASAFGMLSPT-------QLLAANRQAAA 82
            |.:|....||.|.|::.:.        .||...:..|.|     ||.       :|...|.|..:
  Fly   129 SETPKKLLNTMAKSSSQVIIEDVQVLESAMVTPRTVAGS-----SPVPRRSHAYELKVDNNQELS 188

  Fly    83 F-MAQLPMSTLANTL---FPHNPAALFGAWAAQQSLP--PQGTH------LHSPPASPHSP-LST 134
            . ..|..:..:|:.|   ||..|         |::.|  |:..:      |:..||:|..| |:|
  Fly   189 MDDVQSMLEDMASELEKEFPDIP---------QKASPVKPKVLNKSSIRILNKGPAAPVEPRLAT 244

  Fly   135 PL----GSGK-----HPLNSPNSTPQHHEPAKKARKLSV--------KKEFQTEISMSVNDMYHT 182
            |.    .||.     ..|:|........:|.|.|.|::.        ::.|..:..:.::.:.||
  Fly   245 PKVKRDDSGNVAIVTEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHT 309

  Fly   183 SGGPISPPSSGSSPNSTHDGAGGNAGCVGVSKDPSRDKSFTCKICSRSFGYKHVLQNHERTHTGE 247
                                               |.:||.|.:|.:||..|:.|..|...||||
  Fly   310 -----------------------------------RSRSFQCLLCEKSFFSKYDLAKHNFVHTGE 339

  Fly   248 KPFECPECHKRFTRDHHLKTHMRLHTG----------------------------EKPYHCSHCD 284
            :||:|..|.|.|||...|..|.|.||.                            ::|:.|..|.
  Fly   340 RPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCT 404

  Fly   285 RQFVQVANLRRHLRVHTGERPYTCEICDGKFSDSNQLKSHMLVHNGEKPFECERCHMKFRRRHHL 349
            :.|.....|.||..||:...|:.|:.|:..||.:::|..|::.|.|::.:.|:.||..:...|||
  Fly   405 KSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHL 469

  Fly   350 MNHKCGIQSPPTPALSPAMSGDYPVAISAIAIEASTNRFAAMCA----TYGGSNESVD--MEKAT 408
            ..|                          :.....|:..:.:|:    :|...|:.:|  :..||
  Fly   470 SRH--------------------------LRTHTQTSDASFVCSECKVSYSNYNDLLDHALIHAT 508

  Fly   409 PEDDGPLDLSE-DGASSVDGH--------------CSNI------ARRKAQDIRRVFRLPPPQIP 452
            .....|:...: :...||:.|              |.:|      .:|..:|            .
  Fly   509 ASLKCPMCRKQIEDIDSVESHMDQHKQSERHACEFCDHIFLTQKCLQRHIED------------D 561

  Fly   453 HVPSDMPEQTEPEDLSMHSPRSIGSHEQTDDID-------------------LYD--LDDAPASY 496
            ||....|.|.|.||............|..||.:                   ||:  |||:..|:
  Fly   562 HVVEMEPYQNEFEDDGEGEGGVDEKEEHLDDFEDMDNVKQEEFVTEYLEDDALYEDHLDDSDESF 626

  Fly   497  496
              Fly   627  626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_523867.1 SFP1 <212..324 CDD:227516 42/139 (30%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
zf-H2C2_2 237..261 CDD:463886 12/23 (52%)
C2H2 Zn finger 252..272 CDD:275368 9/19 (47%)
zf-H2C2_2 264..289 CDD:463886 9/52 (17%)
C2H2 Zn finger 280..300 CDD:275368 6/19 (32%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
zf-H2C2_2 321..345 CDD:463886 7/23 (30%)
C2H2 Zn finger 336..352 CDD:275368 6/15 (40%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 60/285 (21%)
C2H2 Zn finger 288..308 CDD:275368 1/19 (5%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
C2H2 Zn finger 344..364 CDD:275368 9/19 (47%)
C2H2 Zn finger 372..388 CDD:275370 0/15 (0%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 7/45 (16%)
C2H2 Zn finger 486..506 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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