DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and CG10959

DIOPT Version :9

Sequence 1:NP_001261181.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:198 Identity:60/198 - (30%)
Similarity:90/198 - (45%) Gaps:29/198 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 FTCKICSRSFGYKHVLQNHERTHTGEKPFEC--PECHKRFTRDHHLKTHMRLHTGEKPYHCSHCD 284
            |.|::|.:.|.....|..|.:.|:|.:.|:|  ..|.|.|...|:|.:|.|:|:.|:.|.|..|.
  Fly   256 FACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCG 320

  Fly   285 RQFVQVANLRRHLRVHTGERPYTCEICDGKFSDSNQLKSHMLVHNGEKPFECERCHMKFRRRHHL 349
            .:......|..|.|.||||:|:.|:.|..:|:..:.|..|..:|:.|||::|::|...|.|...|
  Fly   321 YRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKAL 385

  Fly   350 MNHK-------------CGIQSPPTPALSPAMSGDYPVAISAIAIEASTNRFAAMCATYGGSNES 401
            .:||             ||........||..|        .|..::||.|      ||.|...|.
  Fly   386 YHHKHLHLGIKKFKCKICGNAYAQAAGLSAHM--------RAHKLQASVN------ATEGAEAEP 436

  Fly   402 VDM 404
            ::|
  Fly   437 IEM 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_001261181.1 C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
zf-H2C2_2 237..261 CDD:290200 9/25 (36%)
C2H2 Zn finger 252..272 CDD:275368 8/21 (38%)
zf-H2C2_2 264..289 CDD:290200 8/24 (33%)
C2H2 Zn finger 280..300 CDD:275368 5/19 (26%)
zf-H2C2_2 292..316 CDD:290200 10/23 (43%)
C2H2 Zn finger 308..328 CDD:275368 5/19 (26%)
zf-H2C2_2 321..345 CDD:290200 9/23 (39%)
C2H2 Zn finger 336..352 CDD:275368 5/15 (33%)
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368
COG5048 <258..416 CDD:227381 49/157 (31%)
C2H2 Zn finger 258..278 CDD:275368 5/19 (26%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 5/19 (26%)
zf-H2C2_2 328..353 CDD:290200 11/24 (46%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
zf-H2C2_2 357..381 CDD:290200 9/23 (39%)
C2H2 Zn finger 372..392 CDD:275368 7/19 (37%)
C2H2 Zn finger 400..420 CDD:275368 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I1809
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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