DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr and bcl6ab

DIOPT Version :9

Sequence 1:NP_001261181.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_005171194.1 Gene:bcl6ab / 100001936 ZFINID:ZDB-GENE-030131-7523 Length:566 Species:Danio rerio


Alignment Length:301 Identity:99/301 - (32%)
Similarity:151/301 - (50%) Gaps:40/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 NRQAAAFMAQL----------PMSTLANTLFPHNPAALFGAWAAQQSLPPQGTH--LHS------ 123
            ||:|....:::          |.|.|.:...|::||...|......|.|...|:  :|:      
Zfish   256 NRKAPLLSSEVENIEACHTGGPESPLRSDCQPNSPAESSGCSRRPASPPSSITYAKVHNWKKYKF 320

  Fly   124 --PPASPHSPLSTPLGSGKHPLN-SPNSTPQHHEPAKKARKLSVKKEFQTEISMSVNDMYHTSGG 185
              ..::.:|.|:.|     |.:: |.|...:|.....::....:|||   |...||::.:     
Zfish   321 IVLNSTDNSSLTPP-----HTVSESTNQNAEHKGQDNRSTDECIKKE---EHGSSVHNTF----- 372

  Fly   186 PISPPSSGSSPNSTHDGAGGNAGCVGVSKDPS--RD-KSFTCKICSRSFGYK-HVLQNHERTHTG 246
             ....|.||:.::..:....|. |...::.|.  :| |.:.|..|...|.|| :.|.:|:..|||
Zfish   373 -TEESSMGSTNSAERERVYCNE-CESEAEKPQWLQDGKPYKCDRCQAMFHYKGNPLSSHKSVHTG 435

  Fly   247 EKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYTCEIC 311
            |||:.|..|..:|.|..:||||.|:|:|||||.|..|..:|||||:||.|:.:||||:||.|:||
Zfish   436 EKPYRCNVCGAQFNRPANLKTHSRIHSGEKPYKCETCSSRFVQVAHLRAHVLIHTGEKPYPCDIC 500

  Fly   312 DGKFSDSNQLKSHMLVHNGEKPFECERCHMKFRRRHHLMNH 352
            ..:|.....||||:.:|.||||:.||.|.::||.:..|..|
Zfish   501 GTRFRHLQTLKSHLRIHTGEKPYHCENCDLRFRHKSQLRLH 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KrNP_001261181.1 C2H2 Zn finger 224..244 CDD:275368 7/20 (35%)
zf-H2C2_2 237..261 CDD:290200 11/23 (48%)
C2H2 Zn finger 252..272 CDD:275368 9/19 (47%)
zf-H2C2_2 264..289 CDD:290200 14/24 (58%)
C2H2 Zn finger 280..300 CDD:275368 10/19 (53%)
zf-H2C2_2 292..316 CDD:290200 12/23 (52%)
C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
zf-H2C2_2 321..345 CDD:290200 13/23 (57%)
C2H2 Zn finger 336..352 CDD:275368 6/15 (40%)
bcl6abXP_005171194.1 BTB 22..126 CDD:279045
BTB 33..128 CDD:197585
C2H2 Zn finger 412..433 CDD:275368 7/20 (35%)
zf-H2C2_2 426..450 CDD:290200 11/23 (48%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
zf-H2C2_2 453..478 CDD:290200 14/24 (58%)
C2H2 Zn finger 469..489 CDD:275368 10/19 (53%)
zf-H2C2_2 481..506 CDD:290200 13/24 (54%)
C2H2 Zn finger 497..517 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 13/23 (57%)
C2H2 Zn finger 525..543 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I4462
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4623
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.990

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