DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9380 and PGRP-SB1

DIOPT Version :10

Sequence 1:NP_001036571.2 Gene:CG9380 / 38011 FlyBaseID:FBgn0035094 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster


Alignment Length:238 Identity:37/238 - (15%)
Similarity:72/238 - (30%) Gaps:89/238 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VCCLAA---ALILKTKAQENAMLQIPPSLVECYNTSYFMNRDNRLPANMDTLISLIEKVENSYAA 71
            :||||.   ||.::.::...|:....||               |:...:|.:|  |...:|....
  Fly    15 LCCLALSANALQIEPRSSWGAVSARSPS---------------RISGAVDYVI--IHHSDNPNGC 62

  Fly    72 SSGVQADIRTVSVALLHRFRQDGIKKAAGINVADGVIPYSPTGFQFPKLKILLSRLIPGNANTF- 135
            |:..|......::...|:.|::                :|..|:.|         ::.|:...: 
  Fly    63 STSEQCKRMIKNIQSDHKGRRN----------------FSDIGYNF---------IVAGDGKVYE 102

  Fly   136 ------PNSSLTRVERCSLHFMLSSTFDTRTRGDENNVCNQLSQYRAQRLPRSLKKEHENNFISA 194
                  ..|......|.|:..:....|:.             |...||.|.            :|
  Fly   103 GRGFGLQGSHSPNYNRKSIGIVFIGNFER-------------SAPSAQMLQ------------NA 142

  Fly   195 SEWLEARSKRGRSSDSVSKYEQLGELDYESDWAYAGPETSQCP 237
            .:.:|...:||...|:.:.:            .:...:.:.||
  Fly   143 KDLIELAKQRGYLKDNYTLF------------GHRQTKATSCP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9380NP_001036571.2 None
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 30/220 (14%)

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