DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ebp and PCLO

DIOPT Version :10

Sequence 1:NP_611995.1 Gene:Ebp / 38009 FlyBaseID:FBgn0004181 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_054213895.1 Gene:PCLO / 27445 HGNCID:13406 Length:5204 Species:Homo sapiens


Alignment Length:138 Identity:42/138 - (30%)
Similarity:49/138 - (35%) Gaps:33/138 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 PYLIPPGI------PGYNYPLGWPLRYP---------LGP-------YWPNRPPWL---PINSPP 155
            |....||:      ||   |...|::.|         .||       ..|.:||..   |...||
Human   420 PLAQQPGLQSPAKAPG---PTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP 481

  Fly   156 IRPGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGGPSPGGPSPGGPFPGG 220
            .:||   |..|.|..|...:|.|.:|....|.|..|.|..|||  ..||...|....||...|..
Human   482 QQPG---PAKPPPQQPGSAKPPPQQPGSTKPPPQQPGPAKPSP--QQPGSTKPPSQQPGSAKPSA 541

  Fly   221 SPPSPGGP 228
            ..|||..|
Human   542 QQPSPAKP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EbpNP_611995.1 None
PCLOXP_054213895.1 PRK07764 <32..411 CDD:236090
PHA03247 <309..905 CDD:223021 42/138 (30%)
FYVE1_PCLO 587..648 CDD:277313
kgd 947..>1027 CDD:476867
FYVE2_PCLO 1057..1120 CDD:277315
PTZ00121 <1157..1700 CDD:173412
PRK10263 3461..>3966 CDD:236669
PDZ_RIM-like 4493..4588 CDD:467198
C2A_RIM1alpha 4695..4827 CDD:175997
C2 5087..5196 CDD:425499
Blue background indicates that the domain is not in the aligned region.

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