DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and ttk

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001189329.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster


Alignment Length:599 Identity:152/599 - (25%)
Similarity:240/599 - (40%) Gaps:140/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 YSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVI 179
            :.|||||||:::|..||.||..:|..||||......::|||||||||||:|..:|...|.|||::
  Fly     8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIV 72

  Fly   180 VLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGM 244
            :|||.....:::::|||||||:||.|:||...::..|||:::||.|  |.:..|:|||:....|.
  Fly    73 ILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE--VNDDKPSPAAAAAGAGA 135

  Fly   245 LDTSMLSSTFEDE------CPTMVRPSKGGKLLMPSARLFGNASSAIAALGLRRKREQESDRDLE 303
            ..:...::|.:.:      .|...|...||  |:.||...||..:                  |.
  Fly   136 TGSESTATTPQLQRIQPYLVPQRNRSQAGG--LLASAANAGNTPT------------------LP 180

  Fly   304 SDQELGGSSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQTVIKHELLERAERDQEEAPDQDNS 368
            ....|..|:.||:||:.|||:.||      :.|.|.                 .|.::. |::|.
  Fly   181 VQPSLLSSALMPKRKRGRPRKLSG------SSNGTG-----------------NDYDDF-DRENM 221

  Fly   369 QGEAEKISSSPAKTLVERAKEQKSMKEEGSD--QPRS-----LNENHHQL----ELDDEDDDDQD 422
            ..::..:.:.      :...|..|..::|||  ||.:     |||:...|    ..:.:|.....
  Fly   222 MNDSSDLGNG------KMCNESYSGNDDGSDDNQPNAGHTDDLNESRDSLPSKRSKNSKDHRVVS 280

  Fly   423 HEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGKELISGPSSSA 487
            |.|:....:.....|....:|...:::...:|.:|..|   |.||.:..:..:    ||....||
  Fly   281 HHEDNSTSVTPTKATPELSQRLFGSSSTTISATAPGGS---STGPSETISLLE----ISDERESA 338

  Fly   488 ----------DCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGLLTFP 542
                      ...:.|..:...|.:.|....|...|||...:.|..::.......|..:..:   
  Fly   339 PVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEV--- 400

  Fly   543 PPGLRPPGL-------------PDSPPCHMEALEA--QMHAAA------AAAVAAAGSGEHP-FH 585
            ||..|..|.             .:.|..:.:.:.|  .:|:.|      ||.||:.|:..|. ..
  Fly   401 PPATRITGAVTPNAALNAEEQSKEMPKKNQDEVNACIGLHSLANAAEQQAAQVASTGNLHHQLLL 465

  Fly   586 HME-----------HQMEMSLAAAAAAAAMHQ-------REPRDPRDGRDHNAFASNLLGPMGMP 632
            ||.           :|.:...:.::|...|..       .:.:|..|..||.           |.
  Fly   466 HMAANNSMLNTTDYYQQQQQESPSSAGQFMDDDLELLSLNDQQDKSDEPDHE-----------MV 519

  Fly   633 PFGGHNGGHPGNSG 646
            .....|.|.||..|
  Fly   520 TLADENAGLPGYQG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 46/94 (49%)
BTB 141..226 CDD:197585 41/84 (49%)
HTH_psq 791..834 CDD:283007
ttkNP_001189329.1 BTB 23..119 CDD:279045 47/97 (48%)
BTB 34..119 CDD:197585 42/86 (49%)
C2H2 Zn finger 612..638 CDD:275370
zf-C2H2_4 646..669 CDD:290605
C2H2 Zn finger 648..669 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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