DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lov and br

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster


Alignment Length:1118 Identity:235/1118 - (21%)
Similarity:356/1118 - (31%) Gaps:392/1118 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 HYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPV 178
            |:.|||||:|:.|..||:.|...:..|||||.|...||:||::|||||||:|:.:...|||||||
  Fly     6 HFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHPV 70

  Fly   179 IVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESS---------------- 227
            |:|:|.....:.|:|:|:|.||::|.|:.||:.::..|.|:|.||.:..                
  Fly    71 ILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQIQNLAN 135

  Fly   228 ----VPEHTPTPAASPDDFGMLDTSMLSSTF------EDECPTMV--RPSKGGKLLMPSARLFGN 280
                .|.:|.|.:......|.|.....|||.      ....||.|  .||.....|:....:...
  Fly   136 SGGRTPLNTHTQSLPHPHHGSLHDDGGSSTLFSRQGAGSPPPTAVPSLPSHINNQLLKRMAMMHR 200

  Fly   281 ASSAIAALGLRR--KREQESDRDLESDQELGGSS-------PMPRRKQARPRRRSGDVPHDFTLN 336
            :|:|.||.....  ||.:.||..|.....:|..|       |....:.|.|::    .|.||:..
  Fly   201 SSAAAAAEETSHAFKRLRGSDNSLPLSGAVGSGSNNNSPDLPPLHARSASPQQ----TPADFSTI 261

  Fly   337 KTDAESLQTVIKHELLERAERDQEEAPDQDNSQGE--------AEKISS-SPAKTLVERAKEQKS 392
            |....:....:|.|.......:........|..|.        ::|:.| :|:......|.:.||
  Fly   262 KHHNNNNTPPLKEEKRNGPTGNGNSGNGNGNGNGASNGNGISISDKLGSLTPSPLARAGADDVKS 326

  Fly   393 MKEEGSDQPRSLNENHHQLELDDEDDDDQDHEEE-----------------EEQDIEELIHTTNE 440
                   :|..:..:::....:||..:|...|.:                 .:::|.:.:.:.:.
  Fly   327 -------EPMDMVCSNNNANANDEHSNDSTGEHDANRSSSGDGGKGSLSSGNDEEIGDGLASHHA 384

  Fly   441 LRRQAAAAAAN----AAAMS-PN--PSPCLSDGPE-----DLCTTKKG---KELISG-------- 482
            ..:...:.|.|    |||.: ||  ||..|....:     ||..:.:|   ..|:||        
  Fly   385 APQFIMSPAENKMFHAAAFNFPNIDPSALLGLNTQLQQSGDLAVSPQGGSTGSLLSGVIVPGGSG 449

  Fly   483 --PSSSADCESNNNNSSKLQDNNQ----------------------------------------- 504
              ||:|:...:|||::::.|...|                                         
  Fly   450 GTPSNSSSNNNNNNSNNQQQKVEQQSSPHQLLQQQHHSTPHTNSPQLKQEQPKSGGGSCKSSDLH 514

  Fly   505 ----------RIMLSLKDIRQLNANPNPTAI-------------------------HTPTSCSGG 534
                      |....:.|....:|.|:|||.                         |.......|
  Fly   515 IAAGSERSLSRSSQGMPDAGGHSATPSPTAAYHKRERERERERERERERERERSLDHERDLERPG 579

  Fly   535 NNGLLTFPPP------GLRPPG-LPDSPPCHMEALE----------AQMHAAAAAAVAAAGSG-E 581
            ..|....|||      |..|.. ||.....|....|          |..|||.|.|:|.|||. |
  Fly   580 GTGSPPPPPPSHHSHFGQHPLSLLPSHHQLHATHHELSAAAAHHAHAHAHAAHAHALARAGSPME 644

  Fly   582 HPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRDGRDHNAFASNLLGPMGMPPFGGHNGGHPGNSG 646
            |  ||:.|....||:.:.|.::                  ||..         ||..||..|..|
  Fly   645 H--HHLLHHRRASLSPSGAVSS------------------ASGA---------GGRGGGAGGPGG 680

  Fly   647 PGNGCPGQAAHERLEESMNRLSKEL-----------GKEFGKEFGKEFGKEFGPASPMSLQGPFN 700
            ||.........:.:.:: |||...|           ||....:...:..||.....|::     |
  Fly   681 PGGSLLSSVRAQDVAQA-NRLLLPLPLNACHRCDVCGKLLSTKLTLKRHKEQQHLQPLN-----N 739

  Fly   701 APDGPPHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPP 765
            |.....|                                      |::..|..:::.:.:     
  Fly   740 AVCNLCH--------------------------------------KVFRTLNSLNNHKSI----- 761

  Fly   766 PFLKKKMPRPKGQHS-------APRGGPPRSWTNTELT--EALQHVWNKKMTTSQASRIFGIPYN 821
                 ...|.|..||       ..:.|.|.|..:..|:  .|.....|..:.....| :.|...|
  Fly   762 -----YHRRQKNHHSYFHHGAGVSQAGSPGSRLHQSLSSLSAAAAAANNSVNVGGGS-VGGAGGN 820

  Fly   822 SLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGIGGGSGGSTKNEKSKERKEKEKD------- 879
            :    |......:....:|....|.|      ...:.||:..||....:..::::::.       
  Fly   821 A----VAAAAAAAAAAAELLLSPIVG------AAAVAGGTASSTLQLAAAHQQQQQQSSPGIVKP 875

  Fly   880 --------------------KNS----------MSSNGSGGSANSQGGAPTS-GSGPMQHSGELG 913
                                .||          .::.||||.....|..|.| ..|..::.|..|
  Fly   876 CMDFLXDQQQLLQQLFHVALNNSAAAAAAAAAAAAAGGSGGGPGGVGAGPESINGGGQEYGGVQG 940

  Fly   914 PMGQLDLDLGLPLGPPGGPRSNSSEPDLLSAPNALFNPFNPQGFYPDFSGGFPGLPLSMLNLLPP 978
            |.|...:||.......||                               |||..           
  Fly   941 PSGTPTVDLTQLEHAAGG-------------------------------GGFSA----------- 963

  Fly   979 AERHHAAAAMHHL 991
                 |||..|||
  Fly   964 -----AAALQHHL 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 45/94 (48%)
BTB 141..226 CDD:197585 42/84 (50%)
HTH_psq 791..834 CDD:283007 7/44 (16%)
brNP_001162638.2 BTB 22..118 CDD:279045 45/95 (47%)
BTB 33..118 CDD:197585 42/84 (50%)
C2H2 Zn finger 712..729 CDD:275368 2/16 (13%)
C2H2 Zn finger 742..763 CDD:275368 3/68 (4%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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