DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and CG34376

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:749 Identity:162/749 - (21%)
Similarity:251/749 - (33%) Gaps:231/749 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHP 177
            |.:.|.|.|.|::|...|..|.....||||||.|....:.|||:||:.|||:||.:|...|||||
  Fly     3 DEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCKHP 67

  Fly   178 VIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDF 242
            :|:|||....::..:::|||:|.::|....||:.::.|:.||::||..:|    ..:|.:|    
  Fly    68 IIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATNS----NSSPGSS---- 124

  Fly   243 GMLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFGNASSA---IAALGLRRKREQESDRDLES 304
                .|..||:                  .|.|....|.:|.   .::.......:.|:|.:...
  Fly   125 ----VSEKSSS------------------QPPAEESSNTNSTNHHNSSTNSNNNSKSETDHNESK 167

  Fly   305 DQ------ELGGSSPMPRRKQARPRRRSGDVPHDFTLNKT------DAESLQTVIKHELLERAER 357
            .|      ..||:|           |.|.|..|.:|.||.      .::|| ::...:.|.|:.:
  Fly   168 GQSNSRTTSPGGAS-----------RASNDASHLYTSNKRPMPSDFGSDSL-SIYSGKQLRRSLK 220

  Fly   358 DQ-------------EEAPDQDNSQGEAE-KISSSPAKTLVERAKEQKSMKEEGSDQPRSLNENH 408
            |.             :.|...|||....| .:...|..|:.|:..:...:|.|        ::.|
  Fly   221 DHGSGGSEGGGGDHADTAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRE--------SDGH 277

  Fly   409 HQLELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTT 473
            |...|.....:.                      ....:..::|:..:|..:|...:..:.....
  Fly   278 HHGPLSAGGGNS----------------------GSVGSLTSSASPSAPIRNPFAPNFMDSFNYY 320

  Fly   474 KKGKELISGPSSSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGL 538
            |.|..  ||||.|    |||:......:||..:.|.       :....|..::.|...|......
  Fly   321 KGGNS--SGPSGS----SNNSVGPGGVNNNGSVGLG-------SGAEYPNELYMPNDYSKSFANH 372

  Fly   539 LTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAA--------------AAVAAAGSGEHPFHHMEH 589
            :..|..|.....|..:...|...:..:.:..|.              .::..|....|       
  Fly   373 MDIPSSGSNMVMLSTTSLLHGNCVFNRNNTVATQQGMKTYWLCKSYRISMCRARCITH------- 430

  Fly   590 QMEMSLAAAAAAAAMHQREPRDPRDGRDHNAFASNLLGPMGMPPFGGHNGGHPGNSGP------G 648
                 |....:|..:|...|                           |..|..|:|.|      |
  Fly   431 -----LGRIISATGVHNHTP---------------------------HMRGGQGSSAPSTASVSG 463

  Fly   649 NGCP----GQAAHERLEESMNRLSKELGKEFGKEFGKEFGKEFGPASPMSLQGPFNAPDGPPHPP 709
            |..|    .||.:. |.:....|..:|  :.|......|..:..|               ||.||
  Fly   464 NPAPTPISSQAGYS-LTDGGGHLGPDL--QHGNRVTNMFANQTPP---------------PPPPP 510

  Fly   710 SPLPFPGMSSAMTLTPPHMFGLDSPL------------GLFPPGIDPGKLYNP-LMEMSDP---- 757
            .|||.    ::....|.|...|..||            .:...|.....|:|| ||.:..|    
  Fly   511 PPLPV----ASTPHHPHHHHHLGQPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQTPTHHH 571

  Fly   758 ------RDMPGGPPPFLKKKMPRPKGQHSAPRGG 785
                  :..|..|||        |: ||:...||
  Fly   572 QQQHHQQHSPHNPPP--------PQ-QHNLELGG 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 41/94 (44%)
BTB 141..226 CDD:197585 37/84 (44%)
HTH_psq 791..834 CDD:283007
CG34376NP_732741.1 BTB 20..113 CDD:279045 39/92 (42%)
BTB 31..115 CDD:197585 37/83 (45%)
FLYWCH 390..443 CDD:282369 7/64 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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