DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and CG34376

DIOPT Version :10

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:749 Identity:162/749 - (21%)
Similarity:251/749 - (33%) Gaps:231/749 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHP 177
            |.:.|.|.|.|::|...|..|.....||||||.|....:.|||:||:.|||:||.:|...|||||
  Fly     3 DEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCKHP 67

  Fly   178 VIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDF 242
            :|:|||....::..:::|||:|.::|....||:.::.|:.||::||..:|    ..:|.:|    
  Fly    68 IIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATNS----NSSPGSS---- 124

  Fly   243 GMLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFGNASSA---IAALGLRRKREQESDRDLES 304
                .|..||:                  .|.|....|.:|.   .::.......:.|:|.:...
  Fly   125 ----VSEKSSS------------------QPPAEESSNTNSTNHHNSSTNSNNNSKSETDHNESK 167

  Fly   305 DQ------ELGGSSPMPRRKQARPRRRSGDVPHDFTLNKT------DAESLQTVIKHELLERAER 357
            .|      ..||:|           |.|.|..|.:|.||.      .::|| ::...:.|.|:.:
  Fly   168 GQSNSRTTSPGGAS-----------RASNDASHLYTSNKRPMPSDFGSDSL-SIYSGKQLRRSLK 220

  Fly   358 DQ-------------EEAPDQDNSQGEAE-KISSSPAKTLVERAKEQKSMKEEGSDQPRSLNENH 408
            |.             :.|...|||....| .:...|..|:.|:..:...:|.|        ::.|
  Fly   221 DHGSGGSEGGGGDHADTAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRE--------SDGH 277

  Fly   409 HQLELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTT 473
            |...|.....:.                      ....:..::|:..:|..:|...:..:.....
  Fly   278 HHGPLSAGGGNS----------------------GSVGSLTSSASPSAPIRNPFAPNFMDSFNYY 320

  Fly   474 KKGKELISGPSSSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGL 538
            |.|..  ||||.|    |||:......:||..:.|.       :....|..::.|...|......
  Fly   321 KGGNS--SGPSGS----SNNSVGPGGVNNNGSVGLG-------SGAEYPNELYMPNDYSKSFANH 372

  Fly   539 LTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAA--------------AAVAAAGSGEHPFHHMEH 589
            :..|..|.....|..:...|...:..:.:..|.              .::..|....|       
  Fly   373 MDIPSSGSNMVMLSTTSLLHGNCVFNRNNTVATQQGMKTYWLCKSYRISMCRARCITH------- 430

  Fly   590 QMEMSLAAAAAAAAMHQREPRDPRDGRDHNAFASNLLGPMGMPPFGGHNGGHPGNSGP------G 648
                 |....:|..:|...|                           |..|..|:|.|      |
  Fly   431 -----LGRIISATGVHNHTP---------------------------HMRGGQGSSAPSTASVSG 463

  Fly   649 NGCP----GQAAHERLEESMNRLSKELGKEFGKEFGKEFGKEFGPASPMSLQGPFNAPDGPPHPP 709
            |..|    .||.:. |.:....|..:|  :.|......|..:..|               ||.||
  Fly   464 NPAPTPISSQAGYS-LTDGGGHLGPDL--QHGNRVTNMFANQTPP---------------PPPPP 510

  Fly   710 SPLPFPGMSSAMTLTPPHMFGLDSPL------------GLFPPGIDPGKLYNP-LMEMSDP---- 757
            .|||.    ::....|.|...|..||            .:...|.....|:|| ||.:..|    
  Fly   511 PPLPV----ASTPHHPHHHHHLGQPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQTPTHHH 571

  Fly   758 ------RDMPGGPPPFLKKKMPRPKGQHSAPRGG 785
                  :..|..|||        |: ||:...||
  Fly   572 QQQHHQQHSPHNPPP--------PQ-QHNLELGG 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 37/82 (45%)
HTH_psq 791..834 CDD:283007
CG34376NP_732741.1 BTB_POZ_BAB-like 29..112 CDD:349624 37/82 (45%)
FLYWCH 387..443 CDD:461332 7/67 (10%)
Blue background indicates that the domain is not in the aligned region.

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