DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and fru

DIOPT Version :10

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster


Alignment Length:886 Identity:185/886 - (20%)
Similarity:284/886 - (32%) Gaps:352/886 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPPPLPLNMSQSASAVTEAATPENSLPAT 98
            |.|:.|...:::        |...||    ||..||.|.|||            .|:|...:...
  Fly    60 LDLQTPHKRNIE--------TDVRAP----PPPLPPPPLPLP------------PASPSLQISRY 100

  Fly    99 PPSEGALAVPSAPQDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSP 163
            ...:||:      ...:.||||||..::.....:||:.:.|.||||.|...:::||:.:||||||
  Fly   101 NTDQGAM------DQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSP 159

  Fly   164 FFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSV 228
            :|:.:|.:....||:|.|||.|...:::::||||:||::|.|..|...::..||||||||.:::.
  Fly   160 YFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNN 224

  Fly   229 PEH-------------TPTPAASPDDF--------GMLD---------------------TSMLS 251
            ..:             :|| ...|.::        |:.|                     |...|
  Fly   225 LNYRSDCDKLRDSAASSPT-GRGPSNYTGGLGGAGGVADAMRESRDSLRSRCERDLRDELTQRSS 288

  Fly   252 STFEDECPTMVRPSKGGKLLMPSARLFGNASSAIAALGL-------------------------- 290
            |:..:........:.....:   |...||.::|..||||                          
  Fly   289 SSMSERSSAAAAAAAAAAAV---AAAGGNVNAAAVALGLTTPTGGERSPSVGSASAAAAAAAVAA 350

  Fly   291 ----------------------------------------------------------------- 290
                                                                             
  Fly   351 AVAAAANRSASADGCSDRGSERGTLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNNNNNNNNNNN 415

  Fly   291 ------------------RRKREQESDRDLESDQELGGSSPMPRRKQARPRR------------- 324
                              .|:||:|.:|:.:.|:|| .::|:.:...::.||             
  Fly   416 SSSNNNNSSSNRERNNSGERERERERERERDRDREL-STTPVEQLSSSKRRRKNSSSNCDNSLSS 479

  Fly   325 ---------------RSGDVP---------------HDFTLNKTD-------------------- 339
                           :|..||               ||..|:.|.                    
  Fly   480 SHQDRHYPQDSQANFKSSPVPKTGGSTSESEDAGGRHDSPLSMTTSVHLGGGGGNVGAASALSGL 544

  Fly   340 AESLQTVIKHELLERAERDQEE----APDQDNSQGEAEKISSSPAKTLV--------ERAKEQKS 392
            ::||.  ||.||::..::.|..    |...|.....|.|:.:....||:        :...|...
  Fly   545 SQSLS--IKQELMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQHALQAADARDEHND 607

  Fly   393 MKEEGSDQPRSL----------NENHHQLELD---DEDDDDQ--------DHEEE----EEQDIE 432
            .|:...||..::          ::.|...|||   .|.|||.        ||..|    .|.|.|
  Fly   608 AKQLQLDQTDNIDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEVVVDHVREMEAGNEHDPE 672

  Fly   433 EL----IHTTNELRRQAAAAA---ANAAAMSPNPSPCLSDGPEDLCTTK------------KGKE 478
            |:    .|.|....|:|...|   .:..|.|.:.|....||..: |..|            :.:.
  Fly   673 EMKEAAYHATPPKYRRAVVYAPPHPDEEAASGSGSDIYVDGGYN-CEYKCKELNMRAIRCSRQQH 736

  Fly   479 LISGPS-------SSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNN 536
            ::|..|       |..||.:....|..:. |||..:.|...::||:.:         |.....|:
  Fly   737 MMSHYSPHHPHHRSLIDCPAEAAYSPPVA-NNQAYLASNGAVQQLDLS---------TYHGHANH 791

  Fly   537 GLLTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGSGE-----------------HPF 584
            .|...||....|.....||  |..:.......|.:.:|:.|||..                 .|.
  Fly   792 QLHQHPPSATHPSHSQSSP--HYPSASGAGAGAGSVSVSIAGSASGSATSAPASVATSAVSPQPS 854

  Fly   585 HHMEHQMEMSLAAAAAAAAMHQREPRDPRDGRDHNAFASNL 625
            .........:.|.||||||...|        ||||...|.|
  Fly   855 SSSTGSTSSAAAVAAAAAAAANR--------RDHNIDYSTL 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 37/82 (45%)
HTH_psq 791..834 CDD:283007
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 37/82 (45%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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