DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and CG6118

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster


Alignment Length:681 Identity:152/681 - (22%)
Similarity:246/681 - (36%) Gaps:201/681 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HQKLIK---HRQSTKLSMTDFACQAAPVKQPLPLELPLPLSVQL---------QLLAKTPTSDHA 58
            ||:.:.   ||.|:  |.|..|.|.|..:|...:.....|..||         |.|.:.....|.
  Fly   271 HQQAMSQHPHRLSS--SSTPPALQHALQQQQQHMLQQHQLQQQLQHQQQQQHQQQLQQQQQQHHQ 333

  Fly    59 PMHSTPPTTP-PTPPPLPLNMSQSASAVTEAATPENSLPATPPS---EGALAVPSAPQDHYSLRW 119
            ..|...|.|| |:.||.........:...:||..:.......||   :.:.|.|:. .|.|.|.|
  Fly   334 LAHPHQPHTPRPSTPPTTAQQIHITATQHQAAQQQLHQQQQQPSHKQQQSYADPNT-IDQYLLSW 397

  Fly   120 NNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDF 184
            ||...::.|.|.:|.|.:.:||||:.......:|||:|||.|||:||::|.|.|..||::::.|.
  Fly   398 NNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPSSHPILLMADV 462

  Fly   185 RGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDD-------- 241
            ....:..::||||.|:::|..:.|...::..|:::::||......:...:..:||.:        
  Fly   463 EASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSDASDISSPHESDGTECRY 527

  Fly   242 ----------------FGMLDTSMLSS-----TFEDECPTMVRPSKGGKLLMPSARLFGNASSAI 285
                            :|...:|..||     ...:.|||.:  |.||.         ||.:.| 
  Fly   528 ERGTHSVNITSGHAAGYGGAPSSQQSSPSPSLNGPNRCPTPL--SSGGS---------GNPNYA- 580

  Fly   286 AALGLRR----------------KREQESDRDLESDQELGGSSPMPRRKQARPRRRSGDVPHDFT 334
               |.|.                .|...::....:...||||:.                    :
  Fly   581 ---GFREHIKSKATLAETFMKNLNRNNNNNNSSNNYNHLGGSNG--------------------S 622

  Fly   335 LNKTDAES-----LQT--------------------VIKH---EL-----LERAERDQEEAPDQ- 365
            ||.|:|:|     ||.                    ::.|   ||     |:..|||:..:.:| 
  Fly   623 LNLTEADSNSFAILQANSKKMLDSARKQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQH 687

  Fly   366 ----DNSQGEAEKISSSPAKTLVE---------------RAKEQKSMKEEGSDQPRSLNENHHQL 411
                :|:...|:.....|..|.:.               |..|...:....::.....:.|::..
  Fly   688 DDALNNNHSHAQDNIMEPIITTIVPQTPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSS 752

  Fly   412 ELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNP-------------SPCL 463
            .....:|.:.|   ||..::.::.:......|:|....|     :|.|             ||. 
  Fly   753 SSPQSNDCNND---EEALNLVQIPNANGSRNREATPTCA-----TPTPDIQLIKREVKTELSPA- 808

  Fly   464 SDGPEDLCTTKKGKELISGP-----------SSSADCE--SNNNNSSKLQDNNQRIMLSL---KD 512
                |:|.......:.::|.           :|..|.|  ||||||....|||..:.|:|   |.
  Fly   809 ----ENLSNNNGHDDEMAGAGFDRKYDDNNNNSGLDMETDSNNNNSKPGGDNNNGLALALGKHKL 869

  Fly   513 IRQLNAN---PNPTAIHTP----TSCSGGNN 536
            :..:|.|   .:|...|..    .:..||||
  Fly   870 LSAINRNIEQDHPDHEHQDQQDREADHGGNN 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 34/94 (36%)
BTB 141..226 CDD:197585 30/84 (36%)
HTH_psq 791..834 CDD:283007
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 34/99 (34%)
BTB 419..510 CDD:197585 30/90 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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