Protein Alignment lov and psq

DIOPT Version :9

• Sequence 1: NP_611994.3
• Gene: lov / 38007
• FlyBaseID: FBgn0266129
• Length: 1143
• Species: Drosophila melanogaster
• Sequence 2: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Alignment Length: 1210
• Identity: 242/1210 - (20%)
• Similarity: 376/1210 - (31%)
• Gaps: 437/1210 - (36%)

  Fly   114 HYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPV 178
            ::||||||:||.:...|..|.:..:.|||||.|...|::|||:||||||.:||::..|.|||||.
  Fly     9 YFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPT 73

  Fly   179 IVL-KDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDF 242
            |:| .|.....::.|:||:|||||.|.:..||.|::..|.|:::||.|:         |.:.||.
  Fly    74 IILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCET---------AENADDL 129

  Fly   243 GMLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFGNASSAIAALG-----LRRKREQESDRDL 302
            .  |.:..:.|..:.....|               .||..:|....|     |.::::....:..
  Fly   130 N--DAATATITVSENIQQAV---------------VGNIVNAAIVPGAPSPSLEQQQQHHQQQQQ 177

  Fly   303 ESDQELGGSSPMPRRKQARPRRR------------SGDVPHDFTLNKTDA--------------- 340
            :..||......:..::|.:.:::            ||.|.....|..:.|
  Fly   178 QQAQEQHQQQQVHAQQQQQQQQQINAALLTQHGVSSGSVSLSGQLLSSSASGSSGSLAGGQQASQ 242

  Fly   341 --ESLQTVIKHELLERAERDQEEAPDQDNSQGEAEKISSSPAKTLVERAKEQKSMKEEGSDQPRS 403
              ..||...:...|:|:     ::||..:..|......||...|               ..||:.
  Fly   243 TPSGLQPTPRKSRLKRS-----KSPDLSSGGGAGSSGGSSSGST---------------QQQPQP 287

  Fly   404 LNENHHQLEL---------------------------DDEDDDDQDHE----------------- 424
            .:.:|.|..|                           ||.|.:|.:||
  Fly   288 AHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGSGDDSDAEDHEHEHNHGHGHGHGGHTHGHG 352

  Fly   425 --EEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGKELISGPSSSA 487
              .|...|.|.                              ...|..:|.|:..   ::.|:|::
  Fly   353 HSHEHSHDHEH------------------------------EHKPNKICKTEHS---VASPASNS 384

  Fly   488 DCESNN-NNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGLLTFP--------- 542
            ...||| ...|.:....|.|:..:...|......|.|::.     .|.|.|||..|
  Fly   385 SSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLG-----MGMNGGLLGVPMGFLDFTPE 444

  Fly   543 PPGLRPPGLP----------------------------------------DSPPCH--------- 558
            ||.  |...|                                        |..|.|
  Fly   445 PPA--PSATPVTVTEHVDLSCNPSTDTRDLSNTTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGD 507

  Fly   559 --------------MEA--LEAQMHAAAAAAVAAAGSGEHPFH-------HMEHQMEMSLAAAAA 600
                          :||  |.||.||.:.|....|....|..|       |.:.|..:......|
  Fly   508 ESNSNLVQHIKSEVIEAKHLAAQHHALSQAQQQHAHHQAHQQHQQHQQQQHQQQQQHLHAQQLLA 572

  Fly   601 AAAMHQREPRDPRDGRDHNAFASNLLGPMGMPPFGGHNGGHPGNSGPGNGC-----PGQAAHER- 659
            .:.:.|::.:..:..:.|.................|.:|||..::..|...     |.|..||.
  Fly   573 QSQLQQQQQQQQQQQQHHQQQQQQAAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPG 637

  Fly   660 ---LEESMNRLSKELGKEFGKEFGKEFGKEFGPASPMSLQGPFNAPDGPPHPPSPLPFPGMSSAM 721
               ..|.:|.:|......:..:..::        |.|       ..:|.||...
  Fly   638 MIITPEIVNMMSSGHMDMYNSDTSED--------SMM-------IANGSPHDQK----------- 676

  Fly   722 TLTPPHMFGLDSPLGLFPPGIDPG------------------------KLYNPLMEMSDPRDMPG 762
               .||...||...||......||                        .|.|..|.::....:.|
  Fly   677 ---EPHYTNLDQQHGLGGSVCGPGPGGAGGGGGMSGGAGSGSGEKALDALKNQNMSLTKASAIYG 738

  Fly   763 GPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYV 827
            .|...|.::..| .|..:..:.|..:||....|..||:.:.:.:::.::||:.||||.::|.
  Fly   739 IPSTTLWQRAHR-MGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLY--- 799

  Fly   828 RGKYGKSLKLEQLRKDCISGP----PI----EMLQMGIGGGSGGSTKNEKSKERKEKEKDKNSMS 884
                 |..:.|.:|   ::.|    |.    |.|:..:.....|:|..:|
  Fly   800 -----KIARREGIR---LAAPFNAAPTTWTPEDLERALEAIRAGNTSVQK--------------- 841

  Fly   885 SNGSGGSANSQGGAPT--------------SGSGPMQ----------HSGELGPM--GQLDLDLG 923
                   |:::.|.||              |.|.|..          :|..:|.|  .|..:...
  Fly   842 -------ASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYN 899

  Fly   924 LPLGPPGGPRSNSSEPDLLSAPN--ALFNPF-NPQG------FYPDFSGGFPGLPLSMLNLLPPA 979
            ||.....| |....:.|:::..:  ||.|.. |..|      ...:.|..||..|    :..||.
  Fly   900 LPYSSLYG-RFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSQQFPYSP----SPHPPT 959

  Fly   980 ERHHAAAAMH-----------------------------------HLGVSMDED-----CKSVGS 1004
            .:||:....|                                   |....|.:|     .:.|.|
  Fly   960 PQHHSTPQHHSSAQQGPPTPQHMQQHVVHMQQQQQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHS 1024

  Fly  1005 KQSSSVDEDYSGPGIPLSLEHRREISATGPPLTPSNGGTG 1044
            :|...:.:.|...|.|    .|...|.....|..|.||.|
  Fly  1025 QQQQQLQQIYQHHGTP----ERSXESLHAATLMGSTGGGG 1060

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lov	NP_611994.3	BTB	130..225	CDD:279045	45/95 (47%)
		BTB	141..226	CDD:197585	42/85 (49%)
		HTH_psq	791..834	CDD:283007	10/42 (24%)
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	41/83 (49%)
		HTH_psq	717..>747	CDD:283007	6/29 (21%)
		HTH_psq	767..804	CDD:283007	11/44 (25%)
		HTH_psq	821..866	CDD:283007	9/66 (14%)
		HTH_psq	873..916	CDD:283007	8/43 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I10615
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1229475at2759
OrthoFinder	1	1.000	-	-		FOG0000141
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	5.020