DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and psq

DIOPT Version :10

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:XP_061508490.1 Gene:psq / 3289925 VectorBaseID:AGAMI1_006031 Length:1133 Species:Anopheles gambiae


Alignment Length:1124 Identity:227/1124 - (20%)
Similarity:356/1124 - (31%) Gaps:384/1124 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 MSQSASAVTEAAT--PENSLPATPP-SEGALAVPSAPQDHYSLRWNNHQNHILRAFDALLKTKTL 139
            |...|::...|.|  |.::.|||.| |:||    .:...::||||||:|:::...|..||::::.
Mosquito     1 MDTKAASAGPAPTHLPSSTYPATSPYSKGA----RSSHQYFSLRWNNYQSNMTSVFHELLESQSF 61

  Fly   140 VDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVL-KDFRGWVVQAIVDFMYRGEISV 203
            |||||.|...|::|||:||||||.:||::..:.|||||.|:| .|.....:|.|::|:|||||.|
Mosquito    62 VDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDV 126

  Fly   204 PQQRLQTLIQAGESLQVRGLVESSVPE-----------HTPTPAASPDDFGMLDTSMLSSTFEDE 257
            .:..||:|::..|.|:::||.|...|:           :.|..:.||.|      :........:
Mosquito   127 SEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPD------NRHQHHHHQQ 185

  Fly   258 CPTMVRPS------KGGKLLMPSARLFGNASSAIAALGLRRKREQESDRDLES----------DQ 306
            .|....||      .||:....:|...|:..|..::.|........|....:|          ..
Mosquito   186 PPPPPPPSGASGSTSGGRSGSSAAGAGGSHGSGGSSGGNSSNNNNNSSSSSQSTGYSENGKGCST 250

  Fly   307 ELGGSS-----------------------------------------PMPRRKQARPRRRSGDVP 330
            ..|||.                                         |.|.....|.....|.:.
Mosquito   251 GKGGSGGGSGGLGSGAGRTLYHPSQHHHPLHHHLHHHPHHHLHHLHHPPPLGGDPRTTTTPGHIV 315

  Fly   331 HDFTLNKTDAESLQTVIKHELLERAERD---QEEAPDQDNSQGE-------------------AE 373
            .|     .|..|:..|..|:|.....:|   |::...|.:.|.:                   ..
Mosquito   316 ED-----DDDGSVLVVETHDLTTTGSKDKHYQQQQQQQQHHQSQQAHHHPHPHHPHHPQQHPLGS 375

  Fly   374 KISS---------------------------SPAKTLVER---------------AKEQKSMKEE 396
            |::|                           :|..|.|..               ...:.|:..:
Mosquito   376 KMASLGMGVGINGGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSSKYSVPND 440

  Fly   397 GS-----------DQPRSLN-ENH---HQLELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAA 446
            |.           |.|.::. :||   ||.:|..:....|...:::.|. ::|:.....|.:|..
Mosquito   441 GDLRVKFETLRSLDPPNAVQLDNHTVSHQQQLHHQQQQAQQQAQQQAQQ-QQLLQQQQHLLQQQQ 504

  Fly   447 AAAANAAAMSPNPSPCLSDGPEDLCTTKKGKELISGPSSSADCESNNNN-------SSKLQDNNQ 504
            .........:|.|                         :.|..:.|::.       ..:.|...|
Mosquito   505 QQQQQQQRQTPQP-------------------------AGAQQQQNDHQRHSPPHMQQQQQQPQQ 544

  Fly   505 RIMLSLKDIRQLNANPNPTAIHTPTSC----------------SGGNNGLLTFPPP--------- 544
            .:||    :.|.....:||. |:|.|.                |||..|.:|..||         
Mosquito   545 HVML----MDQQQQQHHPTT-HSPASSVSSSSSSQHPENLVTGSGGAAGSVTPGPPTNNSNGNGA 604

  Fly   545 ---------GLRPPGLPDS---PPCHMEALEAQMHAAAAAAVAAAGSGEHPFHHM--EHQMEMSL 595
                     .|:...:.|.   ....:|..::.||........:....:.....|  ....|.|.
Mosquito   605 GGDELKPRLNLKQENISDEQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSK 669

  Fly   596 AAAAAAAAMHQREPRDPRDG---------------------RDHNAFASNLLGPMGMPPFGGHNG 639
            ......::|.......|.:.                     |.||...:......|:|.......
Mosquito   670 VGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQR 734

  Fly   640 GH------PGNSGPGNGCPGQAAHERLEESMNRLSKELGKEFGKEFGKEFGKEFG-PASPM---- 693
            .|      |...||.....        |:|:|...:.|  ..|.....:..|.|| |:|.:    
Mosquito   735 AHRLGIDTPKKEGPSKTWN--------EDSLNSALEAL--RTGTISANKASKAFGIPSSTLYKIA 789

  Fly   694 -----SLQGPFNAPDGPPHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLME 753
                 .|..||||      .|:......:..|:.........:......|  ||..|.||.    
Mosquito   790 RREGIRLAAPFNA------APTTWSAEDLDRALEAIRAGQTSVQKASTEF--GIPTGTLYG---- 842

  Fly   754 MSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGI 818
                                |.|.:........|..|:...:.|||:.|....|:.:||:..:.:
Mosquito   843 --------------------RCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNL 887

  Fly   819 PYNSLL-MYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGIGGGSGGSTKNEKSKERKEKEKDKNS 882
            ||:||. .:.||||           |..|.          |||.|||:.|.             :
Mosquito   888 PYSSLYGRFKRGKY-----------DTPSS----------GGGGGGSSSNA-------------A 918

  Fly   883 MSSNGSGGSANSQGGAPTSGSGPMQHSG----ELGPMGQLDLDLGLPLGPPGGPRSNSSEPDLLS 943
            .::...||.|.|.||   ||:|....:|    .:|...|::..:        .|:.|...|:   
Mosquito   919 AAAATGGGGAGSGGG---SGAGSAASAGTGGNNVGSSPQMEFKI--------EPQHNDHSPE--- 969

  Fly   944 APNALFNPFNPQGFYPDFS 962
                     |.|.:.|..|
Mosquito   970 ---------NTQHYNPALS 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 40/83 (48%)
HTH_psq 791..834 CDD:283007 15/43 (35%)
psqXP_061508490.1 None

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