DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lov and mamo

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:1238 Identity:266/1238 - (21%)
Similarity:395/1238 - (31%) Gaps:472/1238 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAE-TSIRAHKMVLSACSPFFQRVFAETPCKH 176
            :||.|||||:|:::|..|..||:..:||||||||:| |||||||:||||||.:||.:|.|.|..|
  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHPEGH 68

  Fly   177 PVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESS-------VPEHTP- 233
            .:::|||.|...:|.:|:|||:||::|...:|..|::..|||:|:||.|.:       .||..| 
  Fly    69 LIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMTNQNTTLREPEREPD 133

  Fly   234 -------------------TPAASPDDFGMLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFG 279
                               :|||:.|.......:..::|......|....|........:|....
  Fly   134 RLRPQGGGGSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTSTSATSAAATAAATAAT 198

  Fly   280 NAS-------------------------------------------SAIAALGLRRKREQESDRD 301
            :||                                           :|.||..........|:..
  Fly   199 SASTTATAAAGSSNTTTTTAATTTATCATAATSTAATSSSSSVTSAAAAAAAAASASGVAHSEEA 263

  Fly   302 LESDQELGG--------SSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQTVIKHELLERAERD 358
            ..|....||        |||.|.::.:|..      |.|    |.|.                  
  Fly   264 TSSSSSTGGQKREASDRSSPTPAKRSSRMH------PAD----KVDV------------------ 300

  Fly   359 QEEAPDQDNSQGEAEKISSSPAKTLVERAKEQKSMKEEGSDQPRSLNENHH-QLELDDEDDDDQD 422
               |.|::..|.:|:::.|   :.|:.|     ::|:|..|....|:||.. :|...||||||:|
  Fly   301 ---AEDREQEQNQADELLS---EELLGR-----NLKDEEDDDVDELDENEETKLRGRDEDDDDED 354

  Fly   423 HEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGKELISGPSSSA 487
            .||:....::.......|.:..|||.||....     |..|| |..:.|.|          :||:
  Fly   355 EEEDTPMPLDLYQRPNVEPKSAAAATAAQQGG-----SNSLS-GSSNACHT----------NSSS 403

  Fly   488 DCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGG--NNGLLTFPPPGLRPPG 550
            :..:||||::....||               |.|.::..|..|.:||  ::|            |
  Fly   404 NSNNNNNNNNNSSSNN---------------NNNTSSGKTSASSNGGTASSG------------G 441

  Fly   551 LPDSPPC-------------HM--------------EALEAQMHAAAAAAVAAAGSGE------- 581
            ..||...             |.              |.|:..:.....|...|.|..:       
  Fly   442 TADSVVAVDDDDDDDDGGHHHQRQVMDDRLEQDVDEEDLDDDVVVVGPATAMARGIAQRLAHQNL 506

  Fly   582 ----HPFHHMEHQM--------------------------------------------EMSL--- 595
                |..||.:||.                                            ||.|   
  Fly   507 QRLHHTHHHAQHQHSQHHHPHSQHHHTPHHQQHHTHSDDEDAMPVIAKSEILDDDYDDEMDLEDD 571

  Fly   596 -------------------------------------------------AAAAAAAAMH-QREPR 610
                                                             |||||||||. ||...
  Fly   572 DEADNSSNDLGLNMKMGSGGAGGGGGVDLSTGSTLIPSPLITLPSSSAAAAAAAAAAMESQRSTP 636

  Fly   611 DPRDGRDHNAFASNL-LGPMGMPPF-------GGHNGGHPGNSGPGNGCPGQAAH---------- 657
            .....:...|.||:| :|..|..|.       ||::||..|.|......||..|:          
  Fly   637 AMSAAQAAGAGASDLSIGGCGGRPASRSSRDGGGNDGGRGGASSSSLLSPGTVANLLPVQSVPLS 701

  Fly   658 --------ERLEESMNRLSKELGKEFGKEFGKEFGKEFGPASPMSLQGPFNAP---DGPPHPPSP 711
                    |....|.:|..::.....|...|.:....   ||..||...|::|   ......|:|
  Fly   702 LKKEIDCSEDDNSSHSRHMQQRSASAGGGLGGDLDYR---ASHESLLRNFSSPMSAMAASRCPTP 763

  Fly   712 LPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPK 776
            ..||                .|||||....|||.::.:.|...:           :|.::..|.:
  Fly   764 FAFP----------------FSPLGLSLFDIDPSRILSLLHHQT-----------WLAEEALRTR 801

  Fly   777 GQHSAPRGGPPRSWTNTE-LTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQL 840
            |..:||:..|.|..|.:: ||:..|....:.|.|:.|:.......:.                  
  Fly   802 GLLTAPKDFPHRFTTLSDLLTKDYQPGAGQPMVTATATATTASSTSQ------------------ 848

  Fly   841 RKDCISGPPIEMLQMGIGGGSGGSTKNEKSKERKEKEKDKNSMSSNGSGGSANSQGGAPTSGSGP 905
                            :.....|.|:..|..::.::.:     :...:|......||:||:|:  
  Fly   849 ----------------VSASRSGDTQYNKHAQQPQQPQ-----TGGATGSGVGGLGGSPTAGA-- 890

  Fly   906 MQHSGELGPMGQLDLDLGLPLGPPGGPRSNSSEPDLLSAPNALFNPFNPQGFYPDFSGGFPGLPL 970
                         ..:|..|                  .|.|.:.....||         .|...
  Fly   891 -------------SFNLRYP------------------TPTAFYQQQQQQG---------KGAKS 915

  Fly   971 SMLNLLPPAERHHAAAAMHHLGVSMDED-CKSVGSKQSSSVDE--------DYSGPGIPLSLEHR 1026
            |      |:.:..|.::...:.....|| ||    :.|:..||        :.|......|||..
  Fly   916 S------PSPQQMATSSTTVMSNDSGEDSCK----RSSADSDEVTIMELPSERSAQLYKESLEQL 970

  Fly  1027 REISATGPPLTPSNGGTGH---------DXNLWRDWA----AGAANANPMYFPAFELDQEMNPTP 1078
            .:.....|.|..|..|:|.         |....|.:.    |||.:...............:.||
  Fly   971 LQRQRRTPILAGSGSGSGSGTGSGSVIVDAAGLRQYTQLLLAGAGSGGASDLKEKSSSSSTSSTP 1035

  Fly  1079 PSL 1081
            |.|
  Fly  1036 PLL 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 51/95 (54%)
BTB 141..226 CDD:197585 46/85 (54%)
HTH_psq 791..834 CDD:283007 7/43 (16%)
mamoNP_572932.2 BTB 21..118 CDD:279045 51/96 (53%)
BTB 32..118 CDD:197585 46/85 (54%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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