DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lov and CG32121

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:653 Identity:141/653 - (21%)
Similarity:227/653 - (34%) Gaps:203/653 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVF-AETPCK 175
            |..:.|||:|||..:|.....||....|.|||:......:|||::||||||.||..:| |.....
  Fly    27 QQQFCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALEASN 91

  Fly   176 HPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVE--------------- 225
            ||||::.......:.:::.|||.||::|.::::..|:...|:|.::||.:               
  Fly    92 HPVIIIPGASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARSGGG 156

  Fly   226 -------------------------SSVPEHTPTPA----------------------ASPDDFG 243
                                     :..|.|||||:                      .|.:..|
  Fly   157 SYMDTTNEKSSEFERPTTPSPTPTPTLTPSHTPTPSHSLPLPQLPSAALNTPLLANKLGSVNSSG 221

  Fly   244 MLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFG----NASSAIAA-------LGLRRKREQE 297
            | .|:.|.:.|:.   ....||     |:|....|.    |.::.:.|       |.....:|.:
  Fly   222 M-GTTPLENLFKS---LQFYPS-----LLPQPLNFSQTALNKTTELLAKYQQQCQLYQSGMQEDQ 277

  Fly   298 SDRDLESDQELGGSSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQ------TVIKHELLERAE 356
            .:.|....:.|.|.|| |:..:...:....:.....|.|.:.::|.|      .::....:..|.
  Fly   278 LETDCFGSKRLKGDSP-PKELRRLEKSLLKNPKSSSTTNSSSSKSPQECSNPNPIVATSPVTLAP 341

  Fly   357 RDQEEAPDQ-----------DNSQGEAEKISSSP-------AKTLVERAKEQKSMKEEGSDQPRS 403
            ........|           .::.|:.:..||.|       ..|..::|.:.....:.| ..|..
  Fly   342 PTMAHFSPQLPVVKCSSASYPSALGQGQLYSSKPPLYSAAVTPTAAQQAAQMHHHPQPG-PSPYI 405

  Fly   404 LNENHHQLELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMS-------PNPSP 461
            ..|:|.:|:|         |.|:.:             |..||||||.|..|:       ||...
  Fly   406 SAEDHAKLQL---------HIEQYQ-------------REAAAAAAAAAGGMALVSAKSEPNLLS 448

  Fly   462 CLSDGPEDLCTTKKGKELISGPSSS---ADC------ESNNNNSSKLQDNNQRIMLSLKDIRQLN 517
            ..:|..:.|.|..     |..||:|   |.|      .||..|.....:.:|.:..:......::
  Fly   449 LSADRDKSLATAP-----IKPPSNSKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVS 508

  Fly   518 ANPNPTAIHTPTSCSGGNNGLLTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAG---- 578
            .:.:....|.                 ..|.||.|.  ||..||...::...||..|..:.    
  Fly   509 RSKDALRKHV-----------------SYRHPGAPS--PCENEARRKRVSKLAATTVPTSTPMSM 554

  Fly   579 ---------------------SGE---HPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRDGRD-- 617
                                 ||:   :|:..:.:|.:|  ||||||.|:.:..|...:...|  
  Fly   555 SASHTVTSGDVGPAPATTLGCSGQEARNPYLFLPNQFQM--AAAAAAVAVAESSPASGQPSLDLA 617

  Fly   618 HNA 620
            |.|
  Fly   618 HEA 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 34/95 (36%)
BTB 141..226 CDD:197585 31/125 (25%)
HTH_psq 791..834 CDD:283007
CG32121NP_001097599.1 BTB 48..142 CDD:279045 34/93 (37%)
BTB 56..149 CDD:197585 31/92 (34%)
C2H2 Zn finger 474..494 CDD:275370 4/19 (21%)
C2H2 Zn finger 501..518 CDD:275370 0/16 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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