DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and Nacc2

DIOPT Version :10

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001094003.1 Gene:Nacc2 / 296583 RGDID:1309292 Length:585 Species:Rattus norvegicus


Alignment Length:383 Identity:84/383 - (21%)
Similarity:131/383 - (34%) Gaps:131/383 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 DVTLVCAETSIRAHKMVLSACSPFFQRVFA-------ETPCKHPVIVLKDFRGWVVQAIVDFMYR 198
            ||::|....:.:||:.||:|.|.:|:.:|:       |.|...|....        |.|:.|.|.
  Rat    31 DVSIVVKGQAFKAHRAVLAASSLYFRDLFSGNSKSAFELPGTVPPACF--------QQILSFCYT 87

  Fly   199 GEISV-PQQRLQTLIQAGESLQVRGLVES--------SVPEHTPTPAASPDDFGMLDTSMLSSTF 254
            |:::: ..::|..:..|| .||::.:||.        |.| |..:..|..:|        .||..
  Rat    88 GKLTMAASEQLVVMYTAG-FLQIQHIVERGTDLMFKVSSP-HCDSQTAMIED--------ASSEP 142

  Fly   255 EDECPTMVRPSKGGKLLMPSARLFGNASSAIAALGLRRKREQ-----------ESDRDLESDQEL 308
            :..|          ..|.|:...:..:.|....|..|.|.|.           .|.|.|::....
  Rat   143 QSPC----------NQLQPATAAYATSPSVPIPLLTRVKHEAMEMPPATGPGLASKRPLDTGPRD 197

  Fly   309 G-----------GSSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQTVIKHELLERAERDQEEA 362
            |           |::|:     ..||.....||           ||.|:|.         ..::.
  Rat   198 GVAVATGAAGTPGTAPL-----KLPRVSYYGVP-----------SLATLIP---------SIQQV 237

  Fly   363 PDQDNSQGEAEKISSSPAKTLVERAKEQKSMKEEGSDQPRSLNENHHQLELDDEDDDDQDHEEEE 427
            |   ..|||.....:|...|               :|.|.|    :|.   :|||||:......|
  Rat   238 P---YPQGERTSPGASSLPT---------------TDSPTS----YHN---EDEDDDEAYDTMVE 277

  Fly   428 EQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGKELISGPSS 485
            ||..:..|..|...          |....|.|.|..|..    |...: ::|::.|:|
  Rat   278 EQYGQMYIKATGNY----------AVQEKPEPVPLESRS----CVLIR-RDLVALPAS 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 24/88 (27%)
HTH_psq 791..834 CDD:283007
Nacc2NP_001094003.1 BTB_POZ_BTBD14A_NAC2 1..131 CDD:349598 29/109 (27%)
PHA03247 <138..260 CDD:223021 32/174 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..269 13/55 (24%)
BEN 370..447 CDD:214981
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 541..585
Blue background indicates that the domain is not in the aligned region.

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