DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and LOC1273860

DIOPT Version :10

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:XP_312886.5 Gene:LOC1273860 / 1273860 VectorBaseID:AGAMI1_002030 Length:824 Species:Anopheles gambiae


Alignment Length:619 Identity:149/619 - (24%)
Similarity:228/619 - (36%) Gaps:174/619 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PPSEGALAVPSAPQDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSP 163
            |.:.|:    |:|| .:.|||:|||..:|.:...||....|.||||:.....|:||::||||||.
Mosquito    40 PGAAGS----SSPQ-QFCLRWHNHQASLLSSLPLLLDQSHLTDVTLMAEGQKIKAHRVVLSACST 99

  Fly   164 FFQRVFAETP-CKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVE-S 226
            ||..:|.... .::||:||.......|.|::.|||.||::|.:.::..|:...|:|.::||.: :
Mosquito   100 FFSELFRTLDGAQYPVVVLPGASYHAVAALITFMYSGEVNVYEAQISVLLSLAETLGIKGLADFN 164

  Fly   227 SVPEHTPTPAASPDDFGMLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFGNASSAIAALGLR 291
            |.|..:.||:..           .||:.:.:.|:   |....|:..|....|....:..|.|...
Mosquito   165 SNPNKSSTPSTE-----------ASSSRDSDVPS---PYHSMKVSSPVDNYFARPYAFGADLFEM 215

  Fly   292 RKREQESDRDLESDQELGGSSPMPRRKQARPRRRSGDVPHD--FTLNK---TDAESLQTVIKHEL 351
            |...|.    |......|||:.......|    .:|..||.  |..|.   |.|.:|.|....:|
Mosquito   216 RHGAQA----LNLITNAGGSNGAAASNSA----GTGSAPHSEGFAGNNAAHTIAANLSTSKSGDL 272

  Fly   352 LER--AERDQ-----------------EEAPDQDNSQ--------------GEAEKISSSPAKTL 383
            ..|  |||::                 |.|..::..|              |.|::.::||..|.
Mosquito   273 YARFEAERNEQMSAEALCKLNELNLHAESALLKEKQQQHHLNRSATPVRMAGYAQQHANSPHNTA 337

  Fly   384 VERAKEQKSMKEE------GSDQPR--SLNENHH---QLELDDEDDDDQDHEEEEEQDIEEL--- 434
            .  |.:.:|:.|.      |:|..|  .|:.|..   .|:|.:||..|..|..:..|....:   
Mosquito   338 A--AGDARSVVESALFGSFGNDNGRDCKLSANGPLLLGLKLKEEDISDSMHHHQLNQSYGSVPST 400

  Fly   435 -------IHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGK--------------- 477
                   :.....:.:.:||.....||             :|..|:|:.|               
Mosquito   401 PTAQTPGLEDAGRVSQPSAATRKTLAA-------------QDTATSKRKKLEQITESLIETLKQS 452

  Fly   478 ---------ELISGPSSSADCES------------NNNNSSKLQDNNQRIMLSLKDIRQLNANPN 521
                     .|.|.|.:.....|            .|.::||..:|     .||:.... ||..|
Mosquito   453 TESGNKLPLHLFSKPPTVTPVSSTQNPYLAHHHFLTNESASKTPEN-----FSLESSHP-NAASN 511

  Fly   522 PTAIH-TPTSCSGGNNGLLTFP----PPG------LRPPGLPDSPPCHMEALEAQMHAAAAAAVA 575
            ..|:. :|:..:....|....|    |||      |.|   ..||....|.|...:|....|.||
Mosquito   512 ANALRASPSIATATTLGTAASPTTTAPPGTGSLLALTP---SSSPASANENLIKTLHITHPAQVA 573

  Fly   576 AAGSGEHPFHHMEHQMEMSLAAAAAAAAMHQREP 609
            |          ::.|.:.|...:|.     |:.|
Mosquito   574 A----------LQQQQQQSSQQSAT-----QKPP 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 32/83 (39%)
HTH_psq 791..834 CDD:283007
LOC1273860XP_312886.5 BTB_POZ_BAB-like 75..159 CDD:349624 32/83 (39%)
C2H2 Zn finger 600..620 CDD:275371
C2H2 Zn finger 627..648 CDD:275371
Blue background indicates that the domain is not in the aligned region.

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