DRSC/TRiP Functional Genomics Resources

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Protein Alignment lov and zbtb37

DIOPT Version :10

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:XP_004914082.1 Gene:zbtb37 / 100485471 XenbaseID:XB-GENE-979959 Length:583 Species:Xenopus tropicalis


Alignment Length:400 Identity:80/400 - (20%)
Similarity:126/400 - (31%) Gaps:147/400 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 HQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQ--------RVFAETPCKHPV 178
            :.|.:|...:.|.....|.|:.:.....|.||||:||:|.||:|:        ...:.:..|:| 
 Frog    79 YSNSVLSHLNQLRMQGRLCDIVVNVQGQSFRAHKVVLAASSPYFRDHMSLNEMSAVSLSVIKNP- 142

  Fly   179 IVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVE------------------ 225
                    .|.:.::.|.|.|.|.:....:.:.:.|...||::.:::                  
 Frog   143 --------GVFEQLLSFCYTGRICLQIADIISYLTAASFLQMQHIIDKCTQILEGIHLKISSPES 199

  Fly   226 -----SSVPEHT---------------------PTPAASPDDFG----MLDTSMLSSTFEDECPT 260
                 .|.|:|.                     .||.:|....|    :||...||...|...|.
 Frog   200 EEELSQSRPKHAERVQDAHRVSQSLSRSLSPRHSTPRSSGSRRGQVSTVLDIRELSPAEESTSPQ 264

  Fly   261 MVRPSKGGKLLMPSARL---------FGNA------SSAIAALG-LRRKRE----------QESD 299
            ||......:...|..|:         .|:|      ...:..:| :|.|.|          |.|.
 Frog   265 MVEQGSDVESREPILRINRAGQWYVETGSADRGERSDDEVRVMGAMRIKTENLEEWLGPENQPSC 329

  Fly   300 RDLESDQE--------------------LGGSSPMPRRKQARPRRRSGD--VPHDFTLNKTDAES 342
            .|..|.:|                    ||.|.    .|.:||.....|  .|....:..|:   
 Frog   330 EDGSSAEEVTAMVIDTTGHSATTQESYSLGSSG----TKVSRPTSSEIDRFSPSGSVVTMTE--- 387

  Fly   343 LQTVIKHELLERAERDQEEAPDQDNSQGEAEKISSSPAKTLVERAKEQ----------------- 390
                 :|.....:.|..|| |.|::|||:...:..  ....||..:||                 
 Frog   388 -----RHRAKSESPRRMEE-PKQNSSQGDDAGVIG--VSGYVEYLREQEVSERWFRYNPRLTCIY 444

  Fly   391 --KSMKEEGS 398
              ||..::||
 Frog   445 CAKSFNQKGS 454

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 23/90 (26%)
HTH_psq 791..834 CDD:283007
zbtb37XP_004914082.1 BTB_POZ_ZBTB37 72..194 CDD:349531 26/123 (21%)
C2H2 Zn finger 442..462 CDD:275368 3/12 (25%)