DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lov and Btbd18

DIOPT Version :9

Sequence 1:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:795 Identity:173/795 - (21%)
Similarity:252/795 - (31%) Gaps:282/795 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFF-QRVFAETPCKHPVIVLKDF 184
            :||.......||||:.:          ..::.||..:|||||||| :|:..|.|.:...:|| :.
Mouse    25 HHQQQSGVFCDALLQAE----------GEAVPAHCCILSACSPFFTERLERERPVQGRKVVL-EM 78

  Fly   185 RGWVVQA---IVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMLD 246
            .|..:|.   :|||:|..|:.|.|:..|.::.|...|:|..|                       
Mouse    79 GGLKIQTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSEL----------------------- 120

  Fly   247 TSMLSSTFEDECPTMVRPSKGGKL----LMP------SARLFGNAS------------SAIAALG 289
                 .|.:.|...:|:..:|.:|    |.|      |||:.|..|            |.:.|:.
Mouse   121 -----ETLQLEGGKLVKAPQGRRLNRECLQPPAAAPISARVVGPKSRPQTPLPVTQTPSPLGAVR 180

  Fly   290 LRRKREQES--------DRDLESDQEL-----------GGSSPMPRR------------------ 317
            |:...|:|.        :.|..||.:|           ..|||..:|                  
Mouse   181 LKSLGEEEGAHKKTNLPNADSLSDTQLKKKARVCLTQESRSSPSSQREGPKETKSNPGPTALPSL 245

  Fly   318 -----KQARPRR----RSGDVPHDFTLNKTD----AESLQTVIKHELLERAERDQEEAPDQDNSQ 369
                 :|..||:    ||...||.:|...:.    ..|:.|.....|..:....:|.........
Mouse   246 YPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILSGPSSMPTAPGRRLWRQRTVSKEAQGVDKQKP 310

  Fly   370 GEAEKISSSPAKTLVERAKEQK-----------SMKEEGSDQPRSLNE--NHHQLELDDEDD--D 419
            ||...:.|:|..:.|.:..|.|           |..|||......|.:  |....|:..|..  :
Mouse   311 GEVRPLQSTPDPSDVGKPAENKKQSPELRAPTSSSVEEGQVGRVKLRKIVNGTCWEVVQEPPLRN 375

  Fly   420 DQDHEE-EEEQDIEE----LIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGKEL 479
            .||..: .|..|:||    |:.:.||..             .|.......|.||           
Mouse   376 TQDSPQILEPSDVEEPSGTLLSSVNEQE-------------IPARIQLCQDSPE----------- 416

  Fly   480 ISGPSSSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGLLTFPPP 544
                            |.:|||    |:||        |:.:|.  |.......|::.:||....
Mouse   417 ----------------SPRLQD----ILLS--------ASHSPD--HPMVKSEFGSSPMLTGKES 451

  Fly   545 GL----RPPGLPDS----PPCHMEALEAQMHAAAAAAVAAAGSGEHPFHHMEHQMEMSLAAAAAA 601
            .|    |.|...|:    .||..|                               :..:.:|||.
Mouse   452 DLNIDCREPYTFDTTLLGQPCEAE-------------------------------QYRITSAAAT 485

  Fly   602 AAMHQREPRDPRDGRDHNAFASNLLGPMGMPPFGGHNGGHPGNSGPGNGCPGQAAHERLEESMNR 666
            :.:.:             .|...|.|....||.|....  ||    ..||...:.|         
Mouse   486 SELEE-------------IFDFMLCGSDVEPPVGSLES--PG----AEGCRTPSYH--------- 522

  Fly   667 LSKELGKEFGKEF--GKEFGKEFGPASPMSLQG----PFNAPDGPPHPPSPLPFPGMSSAMTLTP 725
            ||     |.||.:  |:|:........|..|.|    |.:....|..|.|||.   |.|..|   
Mouse   523 LS-----ETGKNWIEGEEWCLPDMELWPRDLTGLEKEPVSENKEPVEPFSPLV---MRSENT--- 576

  Fly   726 PHMFGLDSPLGLFPPGIDPGKL-----YNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGG 785
             ..|...||| :.|..:...:|     :.|.:|::..:.:.|.....|......| .|.|.....
Mouse   577 -ESFEPLSPL-VMPSEVSREELSLRGSWTPDLEITSSQPLDGQGEKLLHFDSSDP-SQRSYNHLS 638

  Fly   786 PPRS-WTNTELTEAL 799
            ||.| |..|.|..:|
Mouse   639 PPCSDWAETGLEVSL 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lovNP_611994.3 BTB 130..225 CDD:279045 33/98 (34%)
BTB 141..226 CDD:197585 29/88 (33%)
HTH_psq 791..834 CDD:283007 3/9 (33%)
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 39/151 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 31/161 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637 7/34 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.