DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G80400

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_178156.1 Gene:AT1G80400 / 844380 AraportID:AT1G80400 Length:407 Species:Arabidopsis thaliana


Alignment Length:149 Identity:41/149 - (27%)
Similarity:58/149 - (38%) Gaps:38/149 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LNRTSVLFVSIS-------FIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIPT 287
            |.|..:.|::.|       ||:...|.........:..||   ....|:|   ..|.:||..:|.
plant   258 LYRLCIAFLTFSCIGYAMPFILCATICCCLPCLISVLGFR---ENFSQTR---GATAEAINALPV 316

  Fly   288 KTGKFSDEKDL------------------------DSDCCAICIEAYKPTDTIRILPCKHEFHKN 328
            ...|.....||                        |:.|| ||:..|...:.:|.|||.|.||.:
plant   317 YRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCC-ICLTRYGDDEQVRELPCSHVFHVD 380

  Fly   329 CIDPWLIEHRTCPMCKLDV 347
            |:|.||..:.|||:||.:|
plant   381 CVDKWLKINATCPLCKNEV 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 38/140 (27%)
RING-H2_RNF130-like 302..347 CDD:438330 21/44 (48%)
AT1G80400NP_178156.1 COG5540 <275..399 CDD:227827 36/130 (28%)
RING_Ubox 354..399 CDD:473075 21/45 (47%)
Blue background indicates that the domain is not in the aligned region.

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