DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and ATL8

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_177767.1 Gene:ATL8 / 843974 AraportID:AT1G76410 Length:185 Species:Arabidopsis thaliana


Alignment Length:151 Identity:44/151 - (29%)
Similarity:64/151 - (42%) Gaps:42/151 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 RTISSLNRTS------------VLFVSISFIVL-MIISLV------WLIFYYIQRFRYMQAKDQ- 269
            |.:...|.||            ||.:::....| .||.|:      ||     :|.......|| 
plant     7 RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWL-----RRIASRNRSDQT 66

  Fly   270 -----QSRNLCSVTKKAIMKIPTKTGKFSD-----EKDLDSDCCAICIEAYKPTDTIRILP-CKH 323
                 .:.|. .:.||.:..:|..|  :|.     ||.::   ||||:..:...|.:|:|| |.|
plant    67 HPPPVAAANK-GLKKKVLRSLPKLT--YSPDSPPAEKLVE---CAICLTEFAAGDELRVLPQCGH 125

  Fly   324 EFHKNCIDPWLIEHRTCPMCK 344
            .||.:|||.||..|.:||.|:
plant   126 GFHVSCIDTWLGSHSSCPSCR 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 38/127 (30%)
RING-H2_RNF130-like 302..347 CDD:438330 21/44 (48%)
ATL8NP_177767.1 RING-H2_EL5-like 103..146 CDD:438124 20/45 (44%)
Blue background indicates that the domain is not in the aligned region.

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