DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G53820

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_175785.1 Gene:AT1G53820 / 841819 AraportID:AT1G53820 Length:310 Species:Arabidopsis thaliana


Alignment Length:306 Identity:69/306 - (22%)
Similarity:112/306 - (36%) Gaps:79/306 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 SIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYY----------IQ----------- 259
            |:.....|..|:..:...|::.:....:.|:::.|...:|::          ||           
plant    10 SLFSKFEGEETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGR 74

  Fly   260 -----RFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKD-LDSDCCAICIEAYKPTDTIRI 318
                 ||.:.|:::....| ..:..|.:..|.....|.:|.|| |:   ||:|:......|..|:
plant    75 NPRRRRFVFAQSQEDPLHN-AGLDSKILQSIHVVVFKCTDFKDGLE---CAVCLSDLVDGDKARV 135

  Fly   319 LP-CKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQGLALVEARDES 382
            || |.|.||.:|||.|...|.|||:|:..|.........|||        ..||.... |:...:
plant   136 LPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSE--------GLPQNQNF-ESGHST 191

  Fly   383 ADLNRSRD--FVVDF---PRVF------------VLDSGCVVGAREMLFPCRIPERSQSSLSLRQ 430
            ...|.|:|  ||.:|   |..|            |..:|.||           .|.|.|.     
plant   192 NQHNPSQDQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVV-----------TEESPSG----- 240

  Fly   431 ARDWVSLMSNKLEEQQGLRSMRNDEMQQQLLSARESARHRRSRSAD 476
                 :..::..:.||...|.|:.|:...::...:::....|...|
plant   241 -----NFAASYNDHQQESSSTRSQEVTAVVVDIPDNSSENLSERID 281

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity