DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G49210

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_175347.1 Gene:AT1G49210 / 841344 AraportID:AT1G49210 Length:225 Species:Arabidopsis thaliana


Alignment Length:166 Identity:45/166 - (27%)
Similarity:73/166 - (43%) Gaps:44/166 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 VLMIISLV------WLIFYYIQRFRYMQAKDQQSRNLCS----------------VTKKAIMKIP 286
            |||::|::      .|..:||.|..:.::    ||.:.|                :.|||:...|
plant    58 VLMLLSVLICGIICCLGLHYIIRCAFRRS----SRFMISEPISSLSTPRSSSNKGIKKKALRMFP 118

  Fly   287 TKTGKFSDEKDLD--SDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCKLDVL 348
            ..:  :|.|.:|.  .:.|.||:..:...:.:|:|| |.|.||..|||.||..|.|||.|:..::
plant   119 VVS--YSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLV 181

  Fly   349 KFYGYVFLG------------SEESILEYQPDPPQG 372
            :....: ||            :|..|:...|..|:|
plant   182 ETCQKI-LGDFSQADSMASTPTESVIVRIDPLEPEG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 38/127 (30%)
RING-H2_RNF130-like 302..347 CDD:438330 20/45 (44%)
AT1G49210NP_175347.1 RING-H2_EL5-like 134..177 CDD:438124 19/42 (45%)
Blue background indicates that the domain is not in the aligned region.

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