DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G49200

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_175346.1 Gene:AT1G49200 / 841343 AraportID:AT1G49200 Length:226 Species:Arabidopsis thaliana


Alignment Length:128 Identity:39/128 - (30%)
Similarity:60/128 - (46%) Gaps:25/128 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 SISFIVLMIISLV------WLIFYYIQRFRYMQAKDQQ-------------SRNLCSVTKKAIMK 284
            ::|..|||::|::      .|..:||.|..:.:.....             |.|. .:.|||:..
plant    54 NLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNK-GINKKALRM 117

  Fly   285 IPTKTGKFSDEKDLD--SDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCK 344
            .|..:  :|.|.:|.  .:.|.||:..:...:.||:|| |.|.||..|||.||.:|.|||.|:
plant   118 FPVVS--YSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 39/128 (30%)
RING-H2_RNF130-like 302..347 CDD:438330 21/44 (48%)
AT1G49200NP_175346.1 RING-H2_EL5-like 135..178 CDD:438124 20/42 (48%)
Blue background indicates that the domain is not in the aligned region.

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