DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G33480

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_174614.2 Gene:AT1G33480 / 840242 AraportID:AT1G33480 Length:261 Species:Arabidopsis thaliana


Alignment Length:179 Identity:48/179 - (26%)
Similarity:78/179 - (43%) Gaps:44/179 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 VSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIP---TKTGKFSDEKDL- 298
            :..:||:|.:..|:     |::|         .|.:|.|:..:... ||   ..|.:....|:| 
plant    32 ICFTFIILFLFYLI-----YLRR---------SSSDLSSLGMRTTF-IPGNSLSTIELGLSKELR 81

  Fly   299 ---------------DSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCKLDV 347
                           ||. |::|:..|:|.|.::.:| |||.||.:|||.||..|.|||:|:|.:
plant    82 EMLPIVVFKESFTVMDSQ-CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLAL 145

  Fly   348 LKFYG-------YVFLGSEESILEYQPD-PPQGLALVEARDESADLNRS 388
            :....       ...|.|.:..:..||: .|....:|..:.||..:|.|
plant   146 IPSRSRQSQDDPVPSLVSPDEEVSSQPESEPVNHRVVSTQPESEPVNHS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 38/128 (30%)
RING-H2_RNF130-like 302..347 CDD:438330 22/45 (49%)
AT1G33480NP_174614.2 HRD1 <76..>172 CDD:227568 28/96 (29%)
RING-H2_EL5-like 99..142 CDD:438124 20/43 (47%)
Blue background indicates that the domain is not in the aligned region.

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