DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G04790

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_563717.1 Gene:AT1G04790 / 839412 AraportID:AT1G04790 Length:634 Species:Arabidopsis thaliana


Alignment Length:209 Identity:53/209 - (25%)
Similarity:86/209 - (41%) Gaps:30/209 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 IALVRRGRCTFEEKV-KHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSL 205
            ||...|||...|.:: :|..::.      :|..|.....:...:|:...:...........:.|.
plant   452 IAANPRGRSRLEARLQQHSSRRR------FNPPQARAPVRAPARGRGYRLGGASASLRTALNFSF 510

  Fly   206 TLDKGYNVTISIIEGRRGV--RTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKD 268
            .:|.|.:..:.|:|.....  .:|:|.|   :|.:...|..              ..:..:.|.|
plant   511 PIDMGLDSRMDILEELENAIGHSITSSN---LLHMDRDFTE--------------DDYELLLALD 558

  Fly   269 QQSRNLCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPW 333
            :.:......:...|..:|..|    .:.|...:.|.||:|..|..||||.|||.|:|||:|||||
plant   559 ENNHRHGGASANRINNLPEST----VQTDNFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDPW 619

  Fly   334 LIEHRTCPMCKLDV 347
            |...::||:||..|
plant   620 LGRSKSCPVCKSSV 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 13/75 (17%)
HRD1 <237..>347 CDD:227568 33/109 (30%)
RING-H2_RNF130-like 302..347 CDD:438330 26/44 (59%)
AT1G04790NP_563717.1 RING-H2_PA-TM-RING 588..630 CDD:438118 24/41 (59%)

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