DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gol and AT5G67120

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_201513.1 Gene:AT5G67120 / 836847 AraportID:AT5G67120 Length:272 Species:Arabidopsis thaliana


Alignment Length:89 Identity:23/89 - (25%)
Similarity:38/89 - (42%) Gaps:18/89 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 TKKAIMKIPTKTG------------------KFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHE 324
            |.:.::.|..:||                  |:....|.::..|.||.:..|..:.:..|.|.|:
plant   184 TYEELLSITDETGDERTGLSEEVIDENLIRRKYEKRSDDETKRCVICQQKLKDNEEVSKLGCGHD 248

  Fly   325 FHKNCIDPWLIEHRTCPMCKLDVL 348
            ||..||..||:....||:|..:|:
plant   249 FHFGCIKNWLMVTNKCPLCNREVV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 22/86 (26%)
RING-H2_RNF130-like 302..347 CDD:438330 16/44 (36%)
AT5G67120NP_201513.1 RING_Ubox 226..271 CDD:473075 16/44 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.