DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT5G57750

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_200583.1 Gene:AT5G57750 / 835883 AraportID:AT5G57750 Length:210 Species:Arabidopsis thaliana


Alignment Length:199 Identity:53/199 - (26%)
Similarity:77/199 - (38%) Gaps:58/199 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 SSLNRTSVLFVSISFIVLMIISLVWLIFY------------------------------------ 256
            ||.::...|...||.|||:.|:|:.:||:                                    
plant    20 SSTDKDFDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGR 84

  Fly   257 YIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILP- 320
            |..||....|:..||    .:....::...|..|...|..|     ||:|:..:...|.:|:|| 
plant    85 YQTRFNLHDAEIDQS----FIDALPLLHYKTMIGLRHDLSD-----CAVCLREFTAEDELRLLPK 140

  Fly   321 CKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESI-LEYQPDPPQGLALVEARDESAD 384
            |.|.||..|||.||:.:.|||:|: |.|...|.....|..:| |.::.|          .|.|.|
plant   141 CSHAFHVECIDTWLLTNSTCPLCR-DNLLLLGLTGTASSSTIVLVHESD----------GDNSQD 194

  Fly   385 LNRS 388
            .:.|
plant   195 SDSS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 39/146 (27%)
RING-H2_RNF130-like 302..347 CDD:438330 20/45 (44%)
AT5G57750NP_200583.1 RING-H2_EL5-like 121..164 CDD:438124 20/47 (43%)
Blue background indicates that the domain is not in the aligned region.

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