DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT4G09560

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_192694.2 Gene:AT4G09560 / 826540 AraportID:AT4G09560 Length:448 Species:Arabidopsis thaliana


Alignment Length:462 Identity:106/462 - (22%)
Similarity:175/462 - (37%) Gaps:93/462 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RYGEGKVLNVTGRLIHITATDNFSDDYACTPYIRGTLGAPIPDKGETWIALVRRGRCTFEEKVKH 158
            |..:|.||.|...|      |..||.........||..:| |      ..|:.||.|:||:|:::
plant    46 RSDQGGVLYVAEPL------DACSDLVNTVNVKNGTTVSP-P------YVLIIRGGCSFEDKIRN 97

  Fly   159 VYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRG 223
            ..:......|:|:.:....|..|     ..|.:.|:.|...       :.|.....:....||..
plant    98 AQKAGYKAAIVYDYEDFGFLVSM-----AGNPSGVLIYGTF-------VSKATGEVLKEYAGRTD 150

  Fly   224 --VRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAK--DQQSRNLCSVTKKAIMK 284
              |..:.|...::...::||||.|:.:|.|....::::|.|..:.:  .....:...:.|..|::
plant   151 FEVWLMPSFETSAWSIMAISFISLLAMSAVLATCFFVRRHRVRRRRILALNGNDFHRMPKSMIIR 215

  Fly   285 IPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRT-CPMCKLDVL 348
            :||.......::...|..|.||:|.|:..|.:|||||.|:||..|:|.||.:.:: ||:||.|  
plant   216 MPTTIFNGICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRD-- 278

  Fly   349 KFYGYVFLGSEESILEYQPDPPQGLALVEARDESADLNRSR--DFVVDFPRV-----FVLDSGCV 406
                                         ||..|.|...|.  .|:...|.:     |:|.|...
plant   279 -----------------------------ARSISTDKPPSEHTPFLSRTPSMTPTSSFLLSSSST 314

  Fly   407 V---GAREMLFPCRI-PERSQSSLS-------LRQARDWVSLM--SNKLEE----QQGLRSMRND 454
            .   .:.|:....|: |....:|:.       |..:|...|..  ||:...    .:....:||.
plant   315 TPLQSSHELPISIRVDPSLPSTSMQPHTVPMYLSHSRSHTSFQNGSNRFSRPIPVSRSSADLRNA 379

  Fly   455 EMQQQLLSARESARHRRSRSADGRYSTGCFGGRQRQPSVLVSSLGQPQLHSEVAQMQRSNSSQAL 519
            ..|:...|..:.:..|...|   || |...|......|.:|..|...:.||    :.:::|.::.
plant   380 VSQRSYNSPHQVSLPRFLHS---RY-THILGPGNASRSQVVGLLTSQREHS----LHQNDSRRSF 436

  Fly   520 KHLTDAA 526
            .|...|:
plant   437 IHFASAS 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 28/122 (23%)
UPF0233 226..>258 CDD:299753 8/31 (26%)
zf-RING_2 301..344 CDD:290367 20/43 (47%)
AT4G09560NP_192694.2 PA_C_RZF_like 19..163 CDD:239038 32/141 (23%)
zf-RING_2 234..276 CDD:290367 20/41 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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