DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT3G60080

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_191567.1 Gene:AT3G60080 / 825178 AraportID:AT3G60080 Length:306 Species:Arabidopsis thaliana


Alignment Length:275 Identity:63/275 - (22%)
Similarity:92/275 - (33%) Gaps:100/275 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 YIQRFRYMQAKDQ--QSRNLCSVTKKAIMK------IPTKTGKFS-----DEKDLDSD-CCAICI 307
            |:.|.....|.|.  .|.:..|.:..:::|      |||.....|     |:.|.||. .||:|.
plant   109 YLHRLLRHLASDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLCSTDDSDPDSVLLCAVCK 173

  Fly   308 EAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQG 372
            |.:...::.|.|||.|.:|.:||.|||.:|.:||:|:.: |.....|.:|..|:           
plant   174 EDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFE-LPTTAKVGIGGSEA----------- 226

  Fly   373 LALVEARDESADL---NRSRDFVVDFPRVFVLDSGCVVGAREMLFPCRIPERSQSSLSLRQARDW 434
                |.|...:||   ....|.|.|                                      ||
plant   227 ----EMRIRLSDLATIAADGDDVED--------------------------------------DW 249

  Fly   435 VSLMSNKLEEQQGLRSMRNDEMQQQLLSARESARHRRSRSADGRYSTGCFGGRQRQPSVLVSSLG 499
            :.:       :..||              |.:.||.:.|..        .|..:|..:..||.||
plant   250 LGI-------RNALR--------------RLARRHEQMRLG--------VGEMERNLARTVSGLG 285

  Fly   500 QPQLHSEVAQMQRSN 514
            ......|..:..|||
plant   286 IGMRRREEIEADRSN 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 34/103 (33%)
RING-H2_RNF130-like 302..347 CDD:438330 19/44 (43%)
AT3G60080NP_191567.1 zinc_ribbon_9 18..57 CDD:433910
RING_Ubox 169..210 CDD:473075 18/40 (45%)
Blue background indicates that the domain is not in the aligned region.

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