DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT3G58720

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001326028.1 Gene:AT3G58720 / 825041 AraportID:AT3G58720 Length:317 Species:Arabidopsis thaliana


Alignment Length:97 Identity:32/97 - (32%)
Similarity:46/97 - (47%) Gaps:21/97 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 LIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIR 317
            |..||    |......:.|||               |...|.|:  |...|::|:|.::|.:|:.
plant   143 LSLYY----RNKNPGSESSRN---------------TQNLSGEE--DDKRCSVCLEDFEPKETVM 186

  Fly   318 ILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
            :.||||.||:.||.|||.....||:|:..:||
plant   187 LTPCKHMFHEECIVPWLKTKGQCPVCRFVILK 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 30/93 (32%)
RING-H2_RNF130-like 302..347 CDD:438330 19/44 (43%)
AT3G58720NP_001326028.1 HRD1 <168..294 CDD:227568 22/51 (43%)
RING-H2_SIS3 170..216 CDD:438480 19/45 (42%)
Blue background indicates that the domain is not in the aligned region.

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