DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT3G56580

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_567039.1 Gene:AT3G56580 / 824825 AraportID:AT3G56580 Length:320 Species:Arabidopsis thaliana


Alignment Length:205 Identity:48/205 - (23%)
Similarity:81/205 - (39%) Gaps:55/205 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 SVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTC 340
            |:.....:||..|..|.||..      |.:|.:.::.....:.:||.|.:|.:||.|||::|.:|
plant   165 SIDALPTIKITQKHLKSSDSH------CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSC 223

  Fly   341 PMCKLDVLKFYGYVFLGSEESILEYQPDPPQGLALVEARDESADLNRSRDFVVDFPRVFVLDSGC 405
            |:|:.::                     |.:|    .:....:..|||             .:|.
plant   224 PVCRKEL---------------------PSRG----SSSSTQSSQNRS-------------TNGR 250

  Fly   406 VVGAREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQGLRSMRNDEMQQQLLSARESARHR 470
            ....|..:|....|.||.||.|.:..||    .:|....::|  ...:.:.|||    :...:|:
plant   251 ENSRRRNIFSNLWPFRSSSSSSTQNRRD----TNNTATAEEG--HYHHHQQQQQ----QHQHQHQ 305

  Fly   471 RSRSADGRYS 480
            :.:|..| ||
plant   306 QQQSHMG-YS 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 22/70 (31%)
RING-H2_RNF130-like 302..347 CDD:438330 15/44 (34%)
AT3G56580NP_567039.1 zinc_ribbon_9 6..37 CDD:433910
RING-H2_RNF126-like 186..227 CDD:438329 14/40 (35%)
Blue background indicates that the domain is not in the aligned region.

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