DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT3G28620

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_189503.1 Gene:AT3G28620 / 822492 AraportID:AT3G28620 Length:211 Species:Arabidopsis thaliana


Alignment Length:115 Identity:29/115 - (25%)
Similarity:51/115 - (44%) Gaps:24/115 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 FRYMQAKDQQSRN----------LCSVTKKAIMKI---------PTKTG---KFSDEKDLDSDCC 303
            ::.:||:.:|.|.          ...|:.|...|:         |..|.   :...|::.:|..|
plant    96 YKIVQAQQRQKRQSFYLPQQRPLFMIVSVKLTHKVYNVVSCDSAPLATDFDQESQQEEEEESKTC 160

  Fly   304 AICIE-AYKPTDTIRILPCKHEFHKNCIDPWLI-EHRTCPMCKLDVLKFY 351
            |||:| ..:..|...:..|.|.||:.|:..||. ::.:||:|:..|.|.:
plant   161 AICLENLLRSEDYCEMPTCSHYFHEPCLTEWLTRDNNSCPLCRKPVDKLH 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
UPF0233 226..>258 CDD:299753
zf-RING_2 301..344 CDD:290367 15/44 (34%)
AT3G28620NP_189503.1 RING_Ubox 159..203 CDD:388418 15/43 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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