DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT3G18773

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_850610.1 Gene:AT3G18773 / 821409 AraportID:AT3G18773 Length:220 Species:Arabidopsis thaliana


Alignment Length:128 Identity:37/128 - (28%)
Similarity:63/128 - (49%) Gaps:24/128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 SISFIVLMIISLVW------LIFYYIQRFRYMQAKD-------------QQSRNLCSVTKKAIMK 284
            ::|..|||::|::.      |..:||.|..:::::.             :.|.....:.|||:..
plant    47 NLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKM 111

  Fly   285 IPTKTGKFSDEKDLD--SDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCK 344
            :|..  .:|.|.:|.  .:.|.||:..:...:.:|:|| |.|.||..|||.||.:|.|||.|:
plant   112 LPVV--NYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCR 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 37/128 (29%)
RING-H2_RNF130-like 302..347 CDD:438330 20/44 (45%)
AT3G18773NP_850610.1 RING-H2_EL5-like 129..172 CDD:438124 19/42 (45%)
Blue background indicates that the domain is not in the aligned region.

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