DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and ATL6

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_566249.1 Gene:ATL6 / 819684 AraportID:AT3G05200 Length:398 Species:Arabidopsis thaliana


Alignment Length:383 Identity:92/383 - (24%)
Similarity:151/383 - (39%) Gaps:85/383 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 SISFIVLMIISLVWLIFYYIQRFRYMQ------------AKDQQSRNLCS--VTKKAIMKIPT-- 287
            :::.||:::|:.::.:.::...||:..            |:.:.:.|..:  :....:...||  
plant    48 AMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFL 112

  Fly   288 ----KTGKFSDEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCKLDV 347
                ||.|.. :.:|:   ||||:..::..:|:|:|| |.|.||.:|||.||..|.|||:|:.::
plant   113 YSDVKTQKLG-KGELE---CAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173

  Fly   348 LKFYG---YVFLGSEESILEYQ-----PDP------PQGLALVEARDESADLNRSRDFVVDFPRV 398
            .:...   .|..|..|..||.|     |:|      |:.|...|     .|..|.....||..||
plant   174 AEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSE-----VDSRRLPGVPVDLKRV 233

  Fly   399 FVLDS----GCVVGAREML--FPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQGLRSMRNDEMQ 457
            ....|    ..||...|..  |..|:||    .:..|..:||....:|.|               
plant   234 KFSRSHTTGHSVVQPGECTERFTLRLPE----DVRKRIMKDWKLNRTNSL--------------- 279

  Fly   458 QQLLSARESARHR-----RSRSADGRY---STGCFGGRQRQP-SVLVSSLGQPQLHSEVAQMQRS 513
              |:..|..:..|     |||:...|:   .|..|..|.|.. |:.:.:.|..:. |.|.....|
plant   280 --LVLPRGGSSRRGKPIDRSRARSDRWLFRKTPSFLWRSRDDGSIRLGATGSVRA-SAVPNSTGS 341

  Fly   514 NSSQALKHLTDAAHAQSRQRQRESFDFARTRRRFMRRESDEISLRSLPRRGATSAAHR 571
            :|.:|........:|....|...    ....|..:.::.:..|::|....|:||.:.|
plant   342 DSVRAGDRWAFLRNASFLWRNSS----VHVPRGGVNKDGEGTSVKSTGASGSTSGSVR 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 35/128 (27%)
RING-H2_RNF130-like 302..347 CDD:438330 22/45 (49%)
ATL6NP_566249.1 HRD1 <113..>219 CDD:227568 37/114 (32%)
RING-H2_EL5-like 127..170 CDD:438124 21/45 (47%)
Blue background indicates that the domain is not in the aligned region.

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