DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gol and PJA1

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001369704.1 Gene:PJA1 / 64219 HGNCID:16648 Length:643 Species:Homo sapiens


Alignment Length:240 Identity:54/240 - (22%)
Similarity:90/240 - (37%) Gaps:59/240 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 GAPIPDKGETWIALVR-----RGRCTFEE-KVKHV-YQQNAAGVIIYNDK--QVMQLEKMQIKGK 186
            ||.....|..::..||     ..:.:.|| ::..: |.:|.:.....||.  ::||.....:.|.
Human   430 GASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGN 494

  Fly   187 TRNIAAVITYQNIGQDLSLTLDKGYNVTISIIEG-RRGVRTISSLNRTSVLFVSISFIVLMIISL 250
                      .|:..|.|::.|  ..|..|:.:| ..|:....:::     :|...|:..|.:  
Human   495 ----------NNLEDDSSVSED--LEVDWSLFDGFADGLGVAEAIS-----YVDPQFLTYMAL-- 540

  Fly   251 VWLIFYYIQRFRYMQAKDQQSRNLCSV-----------TKKAIMKIP-----TKTGKFSDEKDLD 299
                     ..|..||.:....:|.|:           :|::|..:|     ...|....|.   
Human   541 ---------EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEM--- 593

  Fly   300 SDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCK 344
              ||.||...|...:....|||.|.|||.|:..||.:..|||:|:
Human   594 --CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 19/94 (20%)
UPF0233 226..>258 CDD:299753 3/31 (10%)
zf-RING_2 301..344 CDD:290367 18/42 (43%)
PJA1NP_001369704.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..363
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..454 5/23 (22%)
RING-H2_PJA1_2 594..639 CDD:319379 19/43 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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