DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf130

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001277679.1 Gene:Rnf130 / 59044 MGIID:1891717 Length:419 Species:Mus musculus


Alignment Length:349 Identity:133/349 - (38%)
Similarity:182/349 - (52%) Gaps:48/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LACLVLLFGGL-PPLTFPATTTTLVAAMSIANQDLERYFRPGNGTHSFSGMEDRIAVDVYNYAFL 72
            ||.|.||...| |.....|:.....|.:::..|:      ||.||                    
Mouse    12 LAALALLTCSLWPTRADNASQEYYTALINVTVQE------PGRGT-------------------- 50

  Fly    73 NWSYVEHGNMLCNMEFAQEQARYG-EGKVLNVTGRLIHITATDNFSDDYACTPYIRGTLGAPIPD 136
                        .:.|..::.||| :.....|.|:::........:|...|.|..|..    :|.
Mouse    51 ------------PLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFF----VPP 99

  Fly   137 KGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQ 201
            ..:.||||::||.|||:||:......||..|:|||:|...:...|...| |.:|.||:..:..|:
Mouse   100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPG-TGDIIAVMITELRGK 163

  Fly   202 DLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQA 266
            |:...|:|..:|.::|..|.|  ....:.:|.|::|||||||||||||..|||||:||:.||..|
Mouse   164 DILSYLEKNISVQMTIAVGTR--MPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNA 226

  Fly   267 KDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCI 330
            :|:..|.|....||||.|:.|:|.|..| |.|.|.|.||:|||:||..|.:|:|||||.|||:|:
Mouse   227 RDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCV 291

  Fly   331 DPWLIEHRTCPMCKLDVLKFYGYV 354
            ||||.||.|||||||::||..|.|
Mouse   292 DPWLSEHCTCPMCKLNILKALGIV 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 40/144 (28%)
UPF0233 226..>258 CDD:299753 20/31 (65%)
zf-RING_2 301..344 CDD:290367 29/42 (69%)
Rnf130NP_001277679.1 PA_GRAIL_like 40..179 CDD:239037 45/181 (25%)
HRD1 <197..>306 CDD:227568 68/108 (63%)
RING-H2_RNF130 262..310 CDD:319717 32/47 (68%)
RING-H2 finger (C3H2C3-type) 264..304 CDD:319717 27/39 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 89 1.000 Domainoid score I7848
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3593
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm43862
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3602
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1212.060

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