DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf130

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_067515.2 Gene:Rnf130 / 59044 MGIID:1891717 Length:419 Species:Mus musculus


Alignment Length:349 Identity:133/349 - (38%)
Similarity:182/349 - (52%) Gaps:48/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LACLVLLFGGL-PPLTFPATTTTLVAAMSIANQDLERYFRPGNGTHSFSGMEDRIAVDVYNYAFL 72
            ||.|.||...| |.....|:.....|.:::..|:      ||.||                    
Mouse    12 LAALALLTCSLWPTRADNASQEYYTALINVTVQE------PGRGT-------------------- 50

  Fly    73 NWSYVEHGNMLCNMEFAQEQARYG-EGKVLNVTGRLIHITATDNFSDDYACTPYIRGTLGAPIPD 136
                        .:.|..::.||| :.....|.|:::........:|...|.|..|..    :|.
Mouse    51 ------------PLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFF----VPP 99

  Fly   137 KGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQ 201
            ..:.||||::||.|||:||:......||..|:|||:|...:...|...| |.:|.||:..:..|:
Mouse   100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPG-TGDIIAVMITELRGK 163

  Fly   202 DLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQA 266
            |:...|:|..:|.::|..|.|  ....:.:|.|::|||||||||||||..|||||:||:.||..|
Mouse   164 DILSYLEKNISVQMTIAVGTR--MPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNA 226

  Fly   267 KDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCI 330
            :|:..|.|....||||.|:.|:|.|..| |.|.|.|.||:|||:||..|.:|:|||||.|||:|:
Mouse   227 RDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCV 291

  Fly   331 DPWLIEHRTCPMCKLDVLKFYGYV 354
            ||||.||.|||||||::||..|.|
Mouse   292 DPWLSEHCTCPMCKLNILKALGIV 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 40/144 (28%)
HRD1 <237..>347 CDD:227568 70/110 (64%)
RING-H2_RNF130-like 302..347 CDD:438330 31/44 (70%)
Rnf130NP_067515.2 PA_GRAIL_like 40..179 CDD:239037 45/181 (25%)
HRD1 <197..>306 CDD:227568 68/108 (63%)
RING-H2_RNF130 262..310 CDD:319717 32/47 (68%)

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